Ll_transcript_390448

• Id Trinity: TRINITY_DN46471_c1_g1_i29
• Name Transcript: Ll_transcript_390448
• Sequence: CATAACGGTTGAAGAACGGGTGCGATGCAGTTGAACATCGTCCATCTAACGGAGTTGGCGTGTTGGTTAAACCAGCGCTGTGCTGTGCTGTGCATAAAGG TGGAAGAGAGAGAGTGTGTGTTACATAACGCAGTCTCAAAACCATTCACCATTTTCGTTATTCTCTTTCCATTTCATTAATCCAATTCATCGTTCCTCTT CATCTCATCTCATTCCAATTCTTCATTGCATTTTCATTATTGATCTTCACTGTTTTCGTTTTTTTATCAGTAGCATTTTCCGCTTCGGTTATGATCAGTG GAGCTTCCGAGATTTTTCTGCCTCCATATGTGATCTCCAGGTTTACATTTTAGGAGTAGCTGAAATGTTGGGAGGCAAATGGTTTTGGTGTTAATTACTT CATCATTTTTTATGGATCTAATAGCTTGGTGAATCTGTGAATATTTGTATTACTTGTCTAAAGGGAAGGAATCAAAATGAGTTGGAGCCCACACATGGAG GTCCACTACAATAACATCAGTTATCCCTATAATACAGCAGGGAGCTTTATTGAATATTTTGAAGGTCTCACCTATGAACATGCCAACTTCATTTTTTCTG GTGCGTCACATGCTCAGGAGAGTTCCTACCCTTCAACTTCAAGCTTTTACAAGTTTGGTCAAGGTTATGATGTAAACCATCATGAGTCACTGGTGAATGA GTATAAGAGGCCATTGGAAAACTCACCGTCAACCAATGAACAGATATCAGCAGCAAGTACACAATGGGAAGAATGTGTCAACACTGACACACAAGACAAT GCTATTGAATGTCCACGAAGACATCATAGTAATTCCAATGATTATCAGGTCATTTGGCAAGACAATATTGATCCTGACGACATGACTTATGAGGAACTCC TTGAATTAGGTGAGGCTGTCGGAACTCAAAGTCGAGGTCTCACCCAAGAACAGATCTCTTTGCTTCCAGTTTCAAAGTACAAGTGTGGGTTCTTCTTCAG GAAGAAGTCACAAGATGAGAGATGTGTTATTTGCCAGATGAAATATAAAAGAGGAGAGAAGCGGATCAGTCTGCCATGTAAACATATATATCATACAAGT TGTGGGAACAAATGGCTTAGCATCAATAAGGCTTGTCCAATATGTTACAGAGAGGTGTTTGCAGACAAGTCAAAACACAATTAATCACATATGAGCAAGT AGAAAGTAACTTGCAATCTTGCATGTTTCTGTTTCTCCTTTACTTTGTTGTCACTCCATCTTGTTGGTGTGCAATAGACCTAATATTCTCTATAACTAAA CTGTTTCAGTAGCATAATATGTAGCTGCTATGTACTCTGCATATGTTGTTGATAGATCTATCTCATTCTCTCCATTTGGATTGTACTTTGTTATGTACAC CCACTTCAATCTGATTGGCTTCTTTTCTTCTCGGAGTGTTGTGTCATTCTTTCTAAATTGCATAAATTTCTTCATACTTGCTAGTTGTTAAACACATCTC CATCATACTTGAAAAATAATTGTTTGTACCTGCT
• Tissue: pods
• Gene name: LI_gene_144873;
• Additional information: details;

Expression of Ll_transcript_390448

FPKM

• PAB: 1
• PNAB: 3.9
• PS1: 4.6
• PS2: 3.3
• PS3: 6.1
• PW1: 2.8
• PW2: 3.3
• PW3: 1.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_390448

• Blastp: E3 ubiquitin ligase BIG BROTHER from Arabidopsis with 43.09% of identity
• Blastx: E3 ubiquitin ligase BIG BROTHER from Arabidopsis with 43.39% of identity
• Eggnog: zinc ion binding(ENOG41121N2)
• Kegg: Link to kegg annotations (AT3G63530)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019448595.1)
• Pfam: Ring finger domain (PF13639.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;