Ll_transcript_390562

Id TrinityTRINITY_DN46487_c6_g1_i2
Name TranscriptLl_transcript_390562
SequenceGTTGATGACGTGGAGAGTGGAAAGGAAGAAGAAGAAGAAGAAGAAGAAGAGGAAGGAGAAGGAGAAGGAGAAGGAGAAGAAGGAGAAGATGATGCTGATG TGGGATATGATGATAAGGCGGATGAAGCGGTCGACGAAACCGGTCGAACTCAGGGAACTGATGATGTAATCAGAGATGAAAAGGAGGCAGTGAATGAAGA AGAAGAGGAAGAAGAAGAAGAGAAGGAGGTGAGTGTTCATGAGGGTGATAACGATGGTCTCGGTGATGATACGACACAAGAGACGGACACTGCTGCTTTG ATGGAAGAAGGAGATGGAGAAGAAGCTGGTGCTGGTGATGGTGATGGTGTGGGTCAAGATATAGAGGAAGAAGAAGAACAAGGAGGTGGTGGTGAAGGTG ATGGTATGGAAGAAGAAGATGAGGTGAGAGAGGAGCAGAGTGAAAGTGTGAGTGGTGGGAAGAGAAAGCGCGGGCCTGCCAAGAATTCTAAGACAACAAG GAGAGTTGCTTCCAAGAAAAAGATGGAAGAGGACGTTTGTTTCATTTGCTTTGATGGCGGTGCCATTGTGCCTTGCAACCGCAGGGGATGTCCTAAGGCT TACCATCCTTCTTGTGTTAATCGTGATGAAGCCTTTTTTCGAACCAAGGGAAAATGGAATTGTGGTTGGCATCTTTGCAGTAACTGTGAGAAGAATGCTC ACTATATGTGCTATACATGTACGTTCTCTTTGTGCAAGGGATGCATCAAAGACGCTATTATCTTTTGTGTTAGGGGAAACAAGGGCTTTTGCGAAACATG CATGACAACTGTGATGTTGATTGAACAGAATGAGCAGGGAATCACGGGACAAGTGGATTTTGATGATAAAAACAGCTGGGAGTATCTCTTCAAGGACTAC TACATAGATCTAAAAGAAAAGCTATCTCTAACATTTGATGAACTTACTGAAGCTAAAAACCCTTGGAAGGGATCTGATATGGCTGCTTCTAAAGATGAAT CACCAGATGAGCTTTATGATGCAAACAATGATAGAGGATCTGACTCAGATAACTCCTACGAGAATATAGGTTCTAGTCGTTCTAAAAGAAGAAAGGGCAA GAAACGGGCAAAATCTCGTTCCAAAGAAGGGAATTCATATGCAGCAACAGTGCGTGCTGCTAATGTGACATCTGCAGATGACCGATCTGAATGGTCTTCA AAAGAGCTTTTGGAGTTTGTTATGCACATGAGAAATGGAGACACATCTATTTTATCTCAGTTTGATGTTCAAGCCCTTTTGCTAGAGTACATCAAAAGAA ATAAGCTTCGGGACCCTCGCCGAAAAAGTCAAATCATTTGTGATGCAAGGCTTCAAAATTTGTTTGGTAAACCAAGAGTGGGACATTTTGAAATGTTAAA GCTTCTTGAATCTCATTTCCTTTTAAAAGAGGACTACCAGGGCGAAGATCTGCAGGGGAGTGTCGTTGATACTGAAGCTACTCATTTAGATGGTGATGGA AACACCGATTCATATCTCAAAGCTGGCAAAGATAAGAGACGTAAAACTCGTAAAAAGGGTGATGAGAGAGGACTCCATTCTAATGTTGATGATTATGCAG CTATTGATAATCACAATATCAATTTAATTTATCTAAGACGTAATTTGGTTGAAGATCTACTTGAAGATACTGAGAATTTTCATGATAAAGCTGTTGGTGC TTTTGTGAGAATAAGAATTTCTGGTAGTGGTCAGAAGCAAGATTTGTACAGGCTGGTTCAGGTTGCAGGTACGAGCAAAGCAGCAGAGCCATATAAAGTG GGTAAAAGGATGACAGATATCTTGCTAGAGATTTTAAATTTAAACAAGACAGAGATTGTATCAATTGATATTATCTCAAACCAGGAGTTCACAGAGGATG AATGCAAACGTCTTCGCCAAAGCATAAAGTGTGGACTTATAAATCGACTGACTGTGGGCAATATTCAGGACAAGGCATTTGCACTTCAGGCAGTTAGAGT AAAAGATTGGCTAGAGACAGAGATAGTGCGGCTAAGTCATCTTCGTGATAGAGCTAGTGAGAAAGGACGGAGAAAAGAGCTCAGAGAATGTGTAGAGAAA TTGCAGCTTTTGAAAACACCTGAAGAGCGTCAACGAAGATTGGAGGAAGTTCCAGAAATACATGTGGATCCCAAAATGGATCCAAGTTATGAGTCTGAAG AAGATGAAGATGAAATGAATGATAAAGGACAAGGTTGTAATAATATAGTGTGAACTTAAAACCATGTATTGCTTCTTTTTCTAATATTTGGTGGTGTTTT CCTTTCTATGCCTGCAGAAAGCTATATGAGGCCTAGAGGATCTGCTGCATTTGGAAGGAAGGCCAGGGAAATTGTTTCTCCTAG BLAST
Tissuepods
Gene nameLI_gene_144981; 
Additional informationdetails; 

Expression of Ll_transcript_390562

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_390562
BlastpZinc finger CCCH domain-containing protein 19 from Arabidopsis with 61.44% of identity
BlastxZinc finger CCCH domain-containing protein 19 from Arabidopsis with 63.68% of identity
EggnogDNA binding nucleic acid binding protein binding zinc ion binding(ENOG4111KSI)
KeggLink to kegg annotations (AT2G16485)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019438191.1)
PfamSWIB/MDM2 domain (PF02201.17)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;