| Id Trinity | TRINITY_DN46493_c3_g4_i2 |
|---|---|
| Name Transcript | Ll_transcript_391621 |
| Sequence | GATAAAGTGAAAAGTACCAAATTAACAGAGATGAATATCGATGTGATAAAATATTGTGAAAAGTGCGAGAAGCACAGAGAGTGAGAAAGAGAAAGATGAT TTGTGTGGTTCAGCAATTGAACCCAAGGTCCTTCTTCCCATTATCATCATCATCATCATCATCATGTTGTTGGTGGTGGAGTAGTTATCATAGTAAGAAG CGAGTTTCGTTTTCCATAGTGAACTCAGTTGCAATATCTAATGCACAGACACAAGAGAGGTTAAAGCTCAAACAACTTTTCCGTGAAGCCAATCAAAGGT GCCTCAATGATCCTATGGATGGCGTTTCCTTCACACTCCAAGACTTTACTCAAGCCCTTGATCACTATGACTTTCACTCTCAACTTGGTACCAAGGTTAT AGGAACTGTGTTCTGCACGGATGAAAATGGAGCACTTGTTGAGATTGCTGCAAAATCTGCTGCATATTTGCCCCTACAAGAGGCTTGCATCCACAGAGTT AACCATGTGGAAGAAGCAGGCATAGTTCCTGGGTTCAGAGGGGAATTTTTTGTCATTGGTGAGAATGAGGCCAATGATAGTTTGATATTGAGTTTGAAGC CTATCCAGTATGGTCTTGCTTGGGAACGTTGTAGACAGCTTCAAGCAGATAATGTTGTTGTCAAGAGTAAGGTTGTTGGTGCAAAAAAAGGAGGGGTGGT GGTTGATGTTGAAGGCCTCAGAGGGTTTGTTCCATTTTCGCAGATATCAACGAAATCAACTGGGGAAGAGCTTCTTGAGAAGGAACTTCCTCTTAAGTTT GAAGAGGTGGGTGAGGAACAGTCTATACTTGTCCTTAGTAACCGCAAGGCCGTGGCTGACAGCCAGCCACAGCTAGGAATTGGATCAGTAGTCATTGGCT CTGTTCAAAGCCTAAAGCCATATGGTGCCATCATTGACATTGGTGGCATTAATGGCCTCCTTCATGTCAGTCAGATCAGTCATGACCGTATAACAGATAT TGAAACTGTTCTTCAACCTGGTGATATA BLAST |
| Tissue | pods |
| Gene name | LI_gene_145050; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_391621
| Blastp | 30S ribosomal protein S1, chloroplastic from Spinacia with 72.3% of identity |
|---|---|
| Blastx | 30S ribosomal protein S1, chloroplastic from Spinacia with 74.55% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019464458.1) |
| Pfam | S1 RNA binding domain (PF00575.22) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |