Ll_transcript_391623

• Id Trinity: TRINITY_DN46493_c3_g8_i2
• Name Transcript: Ll_transcript_391623
• Sequence: CATCCAGAACATGCTAAAAAGATTGGATGTGGAATTGATTATATCACGGTATCTCTCTCTCTCTCTTTCGGCCTCTTTCTTTATCTCATTCTCTGTCTCA GACATTCACACACATCACAGCAGGTGTACTGCTTTTGTTTGCAAAAAGCTTATCCCAACGTTCCGTTGTTTTTTGAGTTGAGTCCAATAGTTATAACATA CATTTTTTAGTTTTAGCAACCTATTGGATGTATGACCCACTAAAAATATTGTCTCTTGCATCAATGGTGATCCACTCCGCACTCCACTTTGCGAAATTCT CTTGCATTTTAGAGGGCCCTAATCCTTAATAGAAGTAACCTAATTGCATAGTTATTGCATGATTGCATCCCATGATGTGCTAATGACTGAACGTAAATAC ACTTGCTTTCACTTGCCTTTGCAATTTATTGAGTCTCTGGTAAGGCTCGATTCTTTCAGCTCTTCATATTGAAGTTGTCTTCATTTTACCCTTTCTAGCA TATCGACCCACTTGATGCTCCAAATCCAACAACTTAGCTTGATCTTTCTCTCATCCCGATGGAGTTACGAATTCACATAGTGAATGCATTTAGTGAGTTT ATACCCTTGTAAAGTCTTTTGCAGCTTGCTAAATTACAGTTTTTGGCCATGATGCTACCTTCATCTGCACTGTTTTTTATGCTGGAAAGGGTGTAAATTG ATTGGGGGGTTTATGTGTGGAGAAAGAAGAAAATAACACCACTGAGTGCTAAGAGTTAGTTACAGGCCGTTACCACCAGTTGTGTGTTGGGTTCTGATGG TTACAGGCAAATACCACTAGTTTAATGTCGGGTTCTGATGCAGGAAAAGTTATTAGATTGTGTAGGTGTAGTTGGAGTCTCATTCGGCCAGTTTGTGAGT GTTTTGTGACTGAGATAGAGCTGTGTTAGGGGCAGTGCACTGTGTTTCTTCAGTGTTTCTCGTGTTTTCTGGTGTATTATCCACGTACATACTCCTTTTC AATTGTGATCAACTCAATAAAGCATTAGCAGTTTAAGTTCATACCTGGGTTTGATTCTTGAGTCTTATCAGATCCACTTATCCCTTGTTAGGCTAAAGAA AAGACAATGCAAATAATGGCTTCTGATCTTGAACAGTCTTACATAGCATTCCAATGCTATGCCTTATTATTATCATTTAAAATAAGCATTTACTGCTTTT GTCTCTTAAACTCTATCCAATTTGGTTTTTCTTGGGTGGCTATAACACTTGTTATGTGGTCTTTATATGTTGCTGAAAAGATTATTGTTCTCTTTTCCCA TGGCAGATTGGATATCATCCTAATTTTGACCGATCTCGGTGCTTGTTCATAGTACGCAAAGATGGAGAGCTGGTTGACTTTTCATTTTGGAAATGCATAA AGGGTTTGATCAGAAAGAATTATCCATTATATGCAGACAGTTTCATTCTGAGACATTTCCGGAAGCGCAGTCCTAGTTTATGAGGTTGGAACTGTCTTTT GCTGTTTGTACCATTACAACATTTTATAATAGAGTTTGCTTCCCCTCCCCCCTTTATTTTTTATGCTTGGTGGCATGCCATTTTAATGGTCTTTCTGAAA GAAAAAACAAATATAGAAATTTCTGGAGTTTAAAAGAATGGTCAGCATTTTGCCCCTCTATAAAAGATTGTCACCAATGTTGGAAAGTGACTTCATTCTA TTGCTGACAAAAGTTGGTAGTGATTTACAAATGTGGGAATGTAGATTATGTATATAGATCTAAATGATTTGTGCCTTTTAGTTCAATGGTATTAAGTTTT AACAATCAGGAGTAAGGGGTTTTCATTGGTTGGTAATTTTTTTAAGGATAAGCTTAAATTATGTGAGAATGAAGCAGCATTTTGCACATCTTTATAAAAG GTACAACACAATTGAGAGATTGTTATCTTCCTCAAGTATATATAGTATTGAGAGTTTGATACATGTTTTGTGTATAAAAACTGTTTATAAGTATAGGTAT ATTTTAGCTTAGTGATCTCTACATGAATTAGTCAATCACATTTGGCACTAGAAAATCCTTGATGCACACAAGAAAAGTAAGCA
• Tissue: pods
• Gene name: LI_gene_145054;
• Additional information: -

Expression of Ll_transcript_391623

FPKM

• PAB: 0.6
• PNAB: 0.3
• PS1: 0.2
• PS2: 0
• PS3: 0.2
• PW1: 0.1
• PW2: 0.2
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_391623

• Blastp: -
• Blastx: Protein DCL, chloroplastic from Lycopersicon with 88.89% of identity
• Eggnog: Protein of unknown function (DUF3223)(ENOG410YGK0)
• Kegg: Link to kegg annotations (544019)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019433112.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;