Ll_transcript_391916

• Id Trinity: TRINITY_DN46494_c3_g1_i3
• Name Transcript: Ll_transcript_391916
• Sequence: GGTGGTTTCCCACAAGCACTAACCACCTCGACCTTCCTTAAATATGTGCAGGATAGAGTTGCACCTTCCTTATCTGTTTGTGTGTTTGGATTTTCATTCC TTACATATTGATATTATACTCAATTTTATATAAAAGCACTTCGATTTCTGACATGTAGCTTGCAGGGCTTTGTTTGGTTGCAAGGTATCTTACAAACTGC TGTACAAGCTATAGGAAAATCTCCTTAGACATTACTGTGAGACTAATTGAGGGTGGTGATCTTTGGAGGGTAAAGTTAGCTTAGATTTGCAGTCCACTTT TGCTTGGACCAATCACCATCAGGTAGGATTATTTTGATTTTATTTTAATGAAACACTTGATTTACATTACATGAACCAAAGTAGTGTTGAATGGCTTTGT GGTAGCATTTATTGCAGCTTAAATATTTTAATGTGTTTGTTTTCTGCTTCCTCCTTTTGGCCTGAAGATCCAAGGCCAAAGGTTCCAAAGATACATTACA CTTAACATATTATGAAATGTAACTTCGTTGTCACCATTGTACTTAAAAAAATAGCATGGAATTTCAGAATATATTTGGCTTGAACATATCAAAATTTTGA TCAATTGTGAATTATTAGAAGTCAACAGAGGATTATGTACCTTATGCAAAATCATGCACTGTACTTCATCAACTAGATCCATAATGCAATGCTGCAATAG TTTTCTATTCCAGAACACTGAAACACAATATTTTAGCTATATATTTCCTATTAGTGTTGAAATCCATTAGTCAATATTCCTCATTCAATCTTAAGTCTTC ACCACTTTTAAATGCCATACAGAGTATTTAGTCATTAACGCATCTATCTTTTGGGTAAATAGCACCAGTTAAGTAACTTATAATTGTTGGAAATTTGCAA AATGCCTTTACTTCATCAATTTACAAACTCTGCATCTTAAATGTTGATAAGAGCAAAAAAGGAAAACATAGAATAGGATCCTCTCTGCTTGTTCCTGGAT CAATTTATATTGGTAAGCTACATGACACTTGTATTATGAATATATATATCATCATACATGTTAGAGCTTCAACAGCATGAACTAATGATTCAAAGAATGA CTTTTCACAATCTCAAAATCGTCGGTCTCGTAAACGCAACTCTCACCTGGTGGAGTCTAAGAAGGTTAGATATACTCAACACTACCATCACACAAATGAA AAAGGCTGTTTCCAGGATTAGACAACAACCCTTTTAGAAAGTGAGAAATCCTTCTCAGTGACACAAAAACACCCTCTCGTTCTGTGCTGAGGTTGCTCGG CAAAGGACACTGAGGAAAAGATGCTCATCACAAGGAATACAAAGCTTTGAGTCTGCTGCAATGAAGTCATATTCTTCCTGAGCTTGATCCAGCAAGGCCT TGAATAGTGGATGATTGAGTATTGCAATCTTGATGACAAATCTCGTGTGTTTTTCTCCTACATAGACAACCAAGTGACCCTTTGGGAGATCATTTGGGAT GGAGCAACTTTCATGCATGGAAGACCACATTACCCATTGAGAGAAGTACTCACAGGCAGCATAAGGTATGATTTGGTTCCCCGTATTCTTCCATTTGTTA AGATACCCTCTCAGAAACTCACTCTTCATAGTTCTTGATTATGTGCTGAGAGAGGAGGAAGAAGGAGAGATTAAGAGAAGAAATTACATCAACTTCTTGG AGAATGAAAAGGCTTATATAATTGCAGCATGGGATTGGAAGTTACTCTAGCAAGTGACTTTTTTAAGTGACCATGTCACCATTAACTAACATTTAATCAT AACCATTCATGTATGGTTGTATGGCCCGAATTTTGTTCTATATGAGAACTGTTTTCACTTGAGTTAGTTCCTATATATATATAGGGAACAACTCACTTGA GAACACTGTGTTATTGTGAGAAATAAAAACAATTAATATGGATCATTGGATCTTATTTGAACAATCAATATTAAAAGATACATGCACATGACTTTTTGAA GTCGTTATGTGACTAATAACCAACTTTTAATTATAACCATGCATTGCCATATTTGCACCTTGCTACGATATTGTACAAAAAAC
• Tissue: pods
• Gene name: LI_gene_145061;
• Additional information: -

Expression of Ll_transcript_391916

FPKM

• PAB: 1.6
• PNAB: 0.6
• PS1: 0.1
• PS2: 0
• PS3: 0.1
• PW1: 1.1
• PW2: 0.9
• PW3: 0.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_391916

• Blastp: Auxin-responsive protein SAUR50 from Helianthus with 43.84% of identity
• Blastx: Auxin-responsive protein SAUR50 from Helianthus with 46.38% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019424653.1)
• Pfam: Auxin responsive protein (PF02519.13)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;