Ll_transcript_390084

• Id Trinity: TRINITY_DN46496_c1_g1_i10
• Name Transcript: Ll_transcript_390084
• Sequence: TGCGCAGCTGATTGCAAATGGTGATGTACCTGAAACCATAGAGGGAAAAAAGGTCATAACCCTCGATATGGGGTTGCTTGTAGCTGGAACTAAATATCGT GGTGAGTTTGAGGAGAGGTTGAAGAAACTGATGGAGGAAATCAAACAAAGTGATGAGATAATACTTTTCATCGATGAAGTGCACACTCTAATTGGAGCAG GAGCAGCTGAAGGGGCAATTGATGCGGCTAACATACTAAAACCAGCTCTTGCAAGAGGTGAACTGCAGTGTATTGGAGCCACAACACTGGACGAATACAG GAAGCACATTGAGAAAGATCCAGCTTTGGAGAGACGATTCCAGCCAGTTAAAGTGCCAGAGCCAACTGTAGATGAAACCATACAAATACTGAAGGGACTT AGAGAGCGCTATGAGATTCACCACAAGCTCCGCTATACCGACGAGGCTCTTGTAGCTGCTGCACAGCTATCTTACCAGTATATCAGGTTTGTCATACTAT ATTTCTATTTCTTCTTCGTTCATCTGTTGCCTTGTAATTTAGCAGCAGCAGTCCTCTTCGAATAATTTTTTCTTGTTTACATTGAAAATCTAATATAGCT GTTTGATATCTATGTGAATCAAAATTCTCATTCTATCTTCTTATTTACTTGCTGTTTTTCTTAACCATGTATTTCCTGGTTATAAATAAAAATAATGCTT TACCCTCCAGTGACCGATTCTTGCCTGACAAAGCTATAGATTTGGTTGATGAAGCTGGTTCACGAGTCCGGCTTCGACATGCACAGTTACCCGAAGAAGC GAGAGAACTTGACAAGGAGGTCAGGCAGATTATCAAGGAGAAAGAAGAAGCTTCTCGCAACCAAGACTTTGAAAAGGTAATGTCTTTCACCTTCACGGGA GGATCTGACTTATATATTTTTAGTGTCAAACCTTATTTTTCAGGAAGACTGTCAACCATCAAGGAAAAAGAAGAACCTTGTTGTCTGAAAAATAATGCTT TTGCTCAAGTACAAATTAAGAGATTGGCTGATTTTTTATTTTTTATAGTTCTAAGTTGATGCATGTTTCAACTTTTTAGTTTATCGACTTTAAAGATTAG CTGTGTTGAAAAAAGGACAGTGTACTGATTTGTTTCTTGTTCAAATGTTCCATATTTTAGCCTATAATTTATGGATTCATGATACACTAATTTCTAATAG GCTGGAGAGCTACGAGATAGAGAGATGGATCTGAAGGCTCAAATCTCAACACTTGTACAGAAGGGCAAGGAGATGAGCAAGGCAGAGACTGAGGCAGGAG ATGCAGGTCCTGTCGTGACTGAAGTTGACATACAACATATCGTGTCCTCCTGGACTGGCATTCCTGTTGAGAAAGTCTCAACAGATGAATCTGATCGCCT CCTGAAGATGGAAGATACTTTACACAAGCGAATCATTGGTCAGGATGAAGCCGTAAAAGCGATTAGTCGGGCTATCCGCCGAGCCCGGGTTGGATTGAAG AACCCTAATCGTCCAATTGCCAGCTTCATCTTTTCTGGTCCAACTGGTGTTGGGAAGTCCGAGTTGGCCAAAGCATTAGCTGCATATTACTTTGGTTCGG AAGAAGCCATGATTCGGCTTGACATGAGTGAATTTATGGAAAGGCACACTGTCTCCAAACTCATTGGTTCACCTCCTGGATATGTCGGCTACACTGAAGG TGGTCAACTGACTGAAGCAGTTCGGCGTCGTCCTTACACTGTTGTACTTTTTGATGAGATTGAGAAAGCCCATCCTGATGTGTTCAACATGATGCTTCAA ATCCTGGAAGATGGAAGACTAACAGACAGCAAGGGCAGAACTGTGGATTTCAAGAACACACTTCTAATAATGACATCAAATGTTGGAAGCAGTGTGATTG AGAAAGGAGGCCGCCGAATTGGACTCGATTTGGATTACGATGAGAAGGATAG
• Tissue: pods
• Gene name: LI_gene_145069;
• Additional information: details;

Expression of Ll_transcript_390084

FPKM

• PAB: 2.1
• PNAB: 0.3
• PS1: 0.3
• PS2: 0.1
• PS3: 0.4
• PW1: 0.7
• PW2: 0.6
• PW3: 1.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_390084

• Blastp: Chaperone protein ClpC, chloroplastic from Pisum with 95.45% of identity
• Blastx: Chaperone protein ClpC, chloroplastic from Pisum with 94.09% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019430101.1)
• Pfam: Sigma-54 interaction domain (PF00158.25)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;