Ll_transcript_390086

• Id Trinity: TRINITY_DN46496_c1_g1_i12
• Name Transcript: Ll_transcript_390086
• Sequence: GAGGAAAAAAAGGTCATAACTCTCGACATGGGATTGCTTGTAGCTGGAACTAAATATCGTGGTGAGTTTGAGGAGAGGTTGAAGAAATTGATGGAGGAAA TCAAGCAAAGTGATGAGATAATACTTTTTATCGATGAAGTGCACACTCTAATTGGAGCAGGAGCAGCTGAAGGAGCAATTGATGCTGCTAACATACTAAA ACCAGCTCTGGCAAGAGGTGAACTGCAGTGTATTGGAGCCACAACACTTGATGAATACAGGAAGCACATTGAGAAAGATCCAGCTTTGGAGAGACGATTC CAGCCGGTTAAAGTGCCAGAGCCAACTGTTGATGAAACCATACAAATACTGAAAGGACTTAGAGAGCGCTATGAGATTCACCACAAGCTCCGCTATACTG ATGAAGCTCTTGTAGCTGCTGCACAGCTATCTTACCAGTATATCAGGTTTGTCATACTTCCTTTCTGTTTCTTCTGTGTTCATTTTCCCCTTGTAATTTA TGCTAGAATAGACATTTTTTTAATAAAATATTCCAAAGTTGCATATTTACACTCAATATCTTCTACTGAGTTAAGTTGATGTATGTTTCAGACTTCTGTA ATTTAGCAGTAGTAGTCCTCTTTGAATCATTTTTGTTGTTGTTTACATTAGAAATCTAATATACTTCTTTGATATCTGTGTGAATCAAAATGCTCATTCT ATCTTATTTAATTCTTGCTGTTTTTCTTAACCATGTATTTCCTGGTTATAAATAAAAATAATGCTTTACCCTCCAGTGACCGATTCTTGCCTGACA
• Tissue: pods
• Gene name: LI_gene_145069;
• Additional information: details;

Expression of Ll_transcript_390086

FPKM

• PAB: 0.1
• PNAB: 0
• PS1: 0
• PS2: 0
• PS3: 0.2
• PW1: 0.1
• PW2: 0
• PW3: 0.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_390086

• Blastp: Chaperone protein ClpC1, chloroplastic from Arabidopsis with 95.45% of identity
• Blastx: Chaperone protein ClpC1, chloroplastic from Arabidopsis with 95.45% of identity
• Eggnog: ATP-dependent CLP protease ATP-binding subunit(COG0542)
• Kegg: Link to kegg annotations (AT5G50920)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_003523172.1)
• Pfam: ATPase family associated with various cellular activities (AAA) (PF00004.28)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;