Ll_transcript_390089

• Id Trinity: TRINITY_DN46496_c1_g1_i14
• Name Transcript: Ll_transcript_390089
• Sequence: GAGGAAAAAAAGGTCATAACTCTCGACATGGGATTGCTTGTAGCTGGAACTAAATATCGTGGTGAGTTTGAGGAGAGGTTGAAGAAATTGATGGAGGAAA TCAAGCAAAGTGATGAGATAATACTTTTTATCGATGAAGTGCACACTCTAATTGGAGCAGGAGCAGCTGAAGGAGCAATTGATGCTGCTAACATACTAAA ACCAGCTCTGGCAAGAGGTGAACTGCAGTGTATTGGAGCCACAACACTTGATGAATACAGGAAGCACATTGAGAAAGATCCAGCTTTGGAGAGACGATTC CAGCCGGTTAAAGTGCCAGAGCCAACTGTTGATGAAACCATACAAATACTGAAAGGACTTAGAGAGCGCTATGAGATTCACCACAAGCTCCGCTATACTG ATGAAGCTCTTGTAGCTGCTGCACAGCTATCTTACCAGTATATCAGTGATCGATTCTTACCCGACAAAGCTATAGATTTGGTTGATGAAGCTGGTTCAAG AGTCCGGCTTCAACATGCACAGTTACCGGAAGAGGCAAGAGAACTCGACAAGGAGGTCAGACAGATTATTAAGGAGAAAGAAGAAGCTGTTCGCAACCAA GATTTTGAAAAGGCTGGAGAGCTACGAGATAGAGAAATGGATCTGAAGGCACAAATCTCAACACTTGTAGAGAAAGGCAAGGAGATGAGCAAGGCAGAGA CTGAGGCAGGAGATACAGGTCCTGTTGTGACTGAAGTTGACATACAACATATTGTGTCCTCCTGGACTGGTATTCCTGTTGACAAAGTCTCAACTGATGA ATCCGATCGCCTCCTCAAGATGGAAGACACTTTACACAAGCGAATTGTTGGTCAGGATGAAGCAGTGAAAGCGATAAGTCGGGCTATCCGTAGAGCCCGG GTTGGATTGAAGAACCCTAATCGTCCAATTGCCAGCTTCATCTTTTCTGGTCCAACTGGTGTTGGGAAGTCTGAGTTGGCCAAAGCATTGGCTGCATACT ACTTTGGCTCTGAAGAAGCCATGATTCGTCTTGACATGAGTGAATTTATGGAAAGGCACACTGTCTCCAAACTTATAGGTTCACCTCCTGGGTATGTTGG TTACACTGAAGGTGGTCAATTGACTGAGGCAGTCCGGCGGCGTCCATACACTGTTGTACTATTTGATGAGATCGAGAAAGCCCATCCCGATGTATTCAAC ATGATGCTTCAGATCCTTGAAGATGGAAGACTAACAGACAGTAAAGGCAGAACTGTTGATTTCAAGAATACACTTCTCATAATGACATCGAATGTTGGAA GCAGCGTGATTGAGAAAGGAGGCCGCAAAATTGGATTCGATCTGGATTATGATGAGAAGGACAGCAGTTACAATAGAATAAAGAGCTTAGTGACAGAGGA GCTAAAACAATACTTCAGGCCCGAGTTTCTGAATAGGTTGGATGAAATGATTGTTTTCAGGCAACTCACAAAACTCGAGGTGAAGGAGATAGCCGACATA CTGCTCAACGAGGTGTTCAATAGACTGAAGACTAAAGACATTGAACTTCAAGTGACAGAAAGGTTTAAGGACAGAGTGGTTGATGAAGGTTACAATCCTA GTTATGGAGCAAGGCCTCTACGAAGAGCGATAATGCGACTTTTGGAGGATAGCATGGCTGAGAAGATGCTTGCTAGAGAGATCAAAGAGGGTGATTCTGT TA
• Tissue: pods
• Gene name: LI_gene_145069;
• Additional information: details;

Expression of Ll_transcript_390089

FPKM

• PAB: 85.2
• PNAB: 71.8
• PS1: 86.8
• PS2: 51.7
• PS3: 71
• PW1: 80.5
• PW2: 105.6
• PW3: 148.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_390089

• Blastp: Chaperone protein ClpC, chloroplastic from Pisum with 95.77% of identity
• Blastx: Chaperone protein ClpC, chloroplastic from Pisum with 95.77% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019437203.1)
• Pfam: ATPase family associated with various cellular activities (AAA) (PF00004.28)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;