Id Trinity | TRINITY_DN46507_c0_g5_i12 |
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Name Transcript | Ll_transcript_520431 |
Sequence | TGCTTAATAAATTATTATTACTTTGAAAGATGCATATTGCATAGTGCACTTTGTTAACCGTGAACACCAACCATCCAATTACAGTACCAAATTTATTTTC CATCTTTTGTTTTTGTTTCTTCCAAAATCCAACAACTCGGTGTGATGGCTCACCACCACCGATTCACAAACTCAGTGACACCCCAAAGCCACTTATTGAT TCCTCAGTGTGCTTGTCCATGCCGTCCATTTCCATCTCAATCTCAATCTCACCGTTCAATTTCATCCTCGAATCTCACCAACTTCCCTTTCTTTTTCACC AAACCTAAACCCATTTTCCTCCGGTTCAATCATCGGTCCGGTTCACCGGTTTACCCTCGCGCCATCGCGCACCCTGAACCGGAACATAGCCTCCCTCAAC AAAATGTACAAAAGGAGGATTTACTCCAGAAATCTCAACAGCAAGTTAGTCAGTTTAGGAACAGAGTTGTTTATGGACTTGGCATTGGGATAACTGTAGG TGGTGTTGTTTTGGCTGGAGGATGGGTTTTCGCAGTGGCCTTGGCTGCTACTGTCTTTGCTGGTGCACGTGAATATTTTGAATTGGTTCGGAGCCGTGGA ATTACTGAAGGAATGACACCTCCTCCACGCTATGTGTCACGAGTCTGCTCTGTCATTTGTGCCTTAATGCCCTTATTTATCATGTATCGTGGTCATATTG ATGTTTCTGTGACTTCTGCTGCTTTTGTTTTGGCCATGGCGTTACTCTTACAAAGAGGAAGTGCCCGCTTTTCACAGCTAAGTAGTGCTATCTTTGGGCT ATTTTATTGTGGCTATCTTCCTTGCTTCTGGGTTAAGCTTCGATGTGGCTTAGCAGCTCCAGCCTTGAACACAGGTAAGTTACCGTAGTTTTCAGTAGTG TTTCAGTTTTAGTTCTGTCCATTATGGGGCTGGGAAAGAACATATGCATTTCTTTTTAATCAAATAAGAAAATTACCGAAGGCATTCTGTCATTAGTTCT CCACTTCAAGGTTATCAAGTCGAGGTTCATATTTTGAGTCGAGTCAAATCGTGTATCATGCGATACATGATCAATAATTTAAAAATAGATATGTATAGAA ATTGAGAAATAATAGATATTAAAATTATAAAGTCATATAATTCATTACTAACCAACAACTAAAAACAGAAACTTCAGTATAACAAAAATTCAAAGTGATA ATAAAGACTTATTCAAGTGTCATGAGAAAGAGAGGAGTGCAACAGAACAAAAGTCAGCTTTGGTAACTGAGAACAAAACACAGTTGTGGTATGGTACGGG CATACAGGCAAAGTGTGAAGTTTGAAAGAGATAAAGTGGCGACTCTTGTCCCAATCGAAAAATCCGTCGGCCCAGGTATTTCATTGTCAGCAATTCTTTG TTTACACTCTTCTCTTTAGTTTAGTCTATGGTCTTTAAAAGTGAGACTCGTACGAAAATTCTCTTTGGCCGTTCTGTTGGTTTAGCAACTCCTAGAGTCC CTTACAACTAGTGGACTAAATTTACAACCCTTGTTAACATCTCCTAGTCAAGTTGACTAAGCCAAATATCCCATTGTAACTTGTGCTTCAATGGCCTTAT ATATACTCCAGCACTCTAGCTATTTTTTTTTCTTGTCTGCAATGCATTAGCATGTTGTGAGGTTGTATTCAAAATTCAAATTTGACATGCCCTACTATTG ATGATCTACAGTGAATGATTGCATTGTCAGCCATTTTATATATTGGTTAATGGTTATATCCTTGTGTGTTAATTCAAACCACATACCACTGATGCTCGAT CCTTTAGATAGATTTTTTAACTTGTCTCTCCATTAAGAACTGTCCTTCCTTGATTGATTATTATTTTGTAGGAATAGGATCAGCGTGGCCTGTACTTCTT GGTGGTCAAGCTCATTGGACAGTTGGTCTTGTGGCAACTTTGATTTCCATGAGTAGCATAATCGCAGCTGATACATTTGCGTTTCTTGGTGGCAAGGCAT TTGGTAAAACACCACTTACGCGTATAAGTCCAAAGAAGACATGGGAGGGTACTATTATAGGCTTTGGTGGTTGCATTGTTACTTCTGTTGTACTAGCAAA ACTTTTCAGATGGCCGATATCATTGTCAAGGTACCTACCTGACCTCGAAGTTAATGTCAGTGTGTTAGTGTTACTCATTTAAATTATGATGCAACTATTG TAATTATTTGCCTGGTAAAATATATAAGTAGAATATTACAAAATATTTAAGAGGGTGAGCCTTGGTGCAATTGCTTGCCCTATGACCTGGAGGTCATGGG ATAAAATCCTAAAAACAACCTCTTTGTTTGTAAGGGTATGCTGCGTACGTCTATCCTCCCCAGATCCACTAGATGTAAGCCTTCTGCATTGGGTCAACCT TTATTACATAATATTTACAAATTGCATTGGTCTGATGAGATTATATGATTGTAATTGATCAGTACTGAAGAAATCATATGAAAGTGACTTATGCAATGAT CACCTTATGAGAGAAACCTTTCCAACCAGATAATAAGGGAGTTTCTTAAAAGTTTCTAGACATGCTGGTTCTTGATCTTCATATTACTGCTGTGTTGAGT GTATACAGCATATAATTTTTCTACGTAGAGTATGTACAGCAAGGTTTGCTATGTGTTGTTCCCTTGGCTCCACTTGTTTAAAAATTAAGATGTTCAAATA GCATCTTTTTTGTTTGATGCAACTTGCAAGGTTACTTGTTTTCTGGTAATCAGTTAACACGCCATATTCTAGTTTAAGTTGAACATTTGTTGTGCAATTT TTTTTAGCCTGAGCACAGTCATTCTCACCTTTTTTAATTCAGAGTATTTACACTTTTTTGTCAGCGC BLAST |
Tissue | pods |
Gene name | LI_gene_145132; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_520431
Blastp | Phosphatidate cytidylyltransferase 4, chloroplastic from Arabidopsis with 56.71% of identity |
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Blastx | Phosphatidate cytidylyltransferase 5, chloroplastic from Arabidopsis with 69.36% of identity |
Eggnog | phosphatidate Cytidylyltransferase(COG0575) |
Kegg | Link to kegg annotations (AT2G45150) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019425808.1) |
Pfam | Cytidylyltransferase family (PF01148.19) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |