Ll_transcript_522706

• Id Trinity: TRINITY_DN46508_c2_g3_i2
• Name Transcript: Ll_transcript_522706
• Sequence: TATCACTCTTATTTCGCATTCACTCTTTTTTCTCTAGAAGGCGTCTTCATAAACGTCTTCGTTTTTCGCTCTTCGCTTTTTCGAATTTGAATTTGAATCT CTTCTAACGTTTCATTAGCGAAAATGAGAGAGTGCATTTCAATCCACATTGGTCAGGCTGGTATCCAGGTTGGAAATGCTTGCTGGGAGCTCTACTGTCT TGAACATGGCATCGGGCCTGATGGACAGATGCCCAGTGACAAGACCGTTGGTGGAGGTGATGATGCTTTCAACACCTTTTTCAGTGAGACCGGTGCCGGA AAGCACGTTCCACGTGCTGTCTTCGTAGATCTTGAACCAACCGTTATCGATGAGGTCAGGACTGGTACCTACCGCCAACTTTTCCACCCAGAGCAACTTA TCAGCGGTAAAGAAGATGCTGCCAACAACTTTGCCCGTGGTCATTATACCAGTAAGTCAAAATATCACAATATATTCCCTTTATTTTTTCCTTTGTACAA TCCCTTTTTGTTTTGTATCTGATATGTTTCCGATGTTTGCTTTTACAGTTGGGAAAGAGATCGTTGATCTGTGTTTGGACCGTATCAGGAAGCTTGCAGA TAACTGCACTGGTCTCCAAGGTTTCTTGGTGTTCAATGCTGTTGGTGGAGGAACTGGTTCTGGTCTCGGTTCTCTTCTGTTGGAGCGTTTGTCTGTTGAT TATGGAAAGAAATCAAAGCTTGGGTTCACTGTTTACCCTTCTCCTCAGGTTTCAACGGCAGTTGTGGAGCCATACAACAGTGTTCTCTCCACCCATTCTC TCCTTGAGCACACCGATGTGGCTGTACTCCTGGACAATGAAGCCATCTATGACATCTGCAGGAGGTCCCTTGATATTGAGAGGCCCACTTACACCAATTT GAACAGGTTGATATCTCAGATCATATCATCCTTGACCACTTCATTGAGGTTCGATGGGGCTATCAACGTGGATGTTACTGAGTTCCAGACTAACCTTGTG CCATATCCCCGCATCCATTTCATGTTGTCCTCATATGCCCCTGTCATCTCAGCTGCCAAGGCATACCATGAGCAGCTTTCAGTGCCGGAGATCACAAATG CTGTGTTTGAGCCCTCAAGTATGATGGCCAAGTGTGACCCTAGGCATGGCAAGTACATGGCTTGCTGCTTGATGTACCGGGGAGACGTTGTTCCAAAGGA TGTCAATGCTGCGGTTGGCACCATAAAAACCAAAAGAACTGTTCAGTTTGTTGATTGGTGCCCAACTGGCTTCAAATGTGGTATCAACTATCAGCCCCCT ACAGTTGTGCCTGGCGGTGACCTTGCTAAGGTGCAACGGGCTGTTTGCATGATCAGTAATAACACTGCAGTTGCTGAAGTGTTCTCTCGAATTGACCACA AATTTGATCTCATGTATGCAAAAAGAGCTTTTGTCCACTGGTATGTCGGTGAAGGGATGGAAGAAGGGGAGTTCTCAGAAGCCCGTGAAGATCTTGCTGC TCTTGAGAAAGACTACGAGGAAGTTGGTGCAGAGGGAGCAGAAGATGAAGAGGAAGGAGATGATTATTGATCTCAAAATGTAAGACATTTTCATTATACT TTGTTTCCAAGATGAGGGTATGCTTTGTTACATCGCCCTACAACCTATTGTTTTTGTTAATCAATGTGTGATATAGTTTGGTCGTTCATACTGTGAAATA GTCAACATTATGCCTCTACTTGTTGATTTAGTATCGGTTCATCTGTTGTGTTGTTTGTGTCGACAATCATATTAACTCGGAATTGTGCATCTCAAATGTT TATTTTCTTCTATTCACGTTTGCAAGTTACAATTTCTACTAGATTTCCATGTTAATCAAGCTGAGGCATTCAGCCCCACTTATTTCATACAGTATTTATG TTTCTTGACTTAAATTATAACTTTG
• Tissue: pods
• Gene name: LI_gene_145146;
• Additional information: details;

Expression of Ll_transcript_522706

FPKM

• PAB: 0
• PNAB: 2.3
• PS1: 0
• PS2: 0.2
• PS3: 0.8
• PW1: 0.6
• PW2: 0.2
• PW3: 1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_522706

• Blastp: Tubulin alpha-3 chain from Eleusine with 95.16% of identity
• Blastx: Tubulin alpha-1/2/3 chain from Naegleria with 92.62% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019460937.1)
• Pfam: Tubulin/FtsZ family, GTPase domain (PF00091.24)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;