Ll_transcript_522713

• Id Trinity: TRINITY_DN46508_c2_g3_i4
• Name Transcript: Ll_transcript_522713
• Sequence: AAAGCAAAGGCATCATAATATACAGTGGACCCCATTTCCAAGCTAGGCTGGCACCATTCATAGTGGGCCGTTTTCTAAACCCTTATCATTTCCCCTTTTC TTCTTCTTCTTCTTCACCTTTCATATTCCAAAATCAAAGAGAGAGAAAACCAAAATGAGAGAAATCATAAGCATTCACATCGGTCAAGCCGGTATTCAAG TCGGAAATTCATGTTGGGAACTCTATTGTCTCGAACATGGCATTAACCCTGATGGTATGATGCCAAGTGACTCAACCGTTGGAGTTGCACACGATGCGTT CAACACGTTCTTCAGCGAAACCGGTTCTGGAAAACACGTTCCACGCGCCATTTTCGTCGATCTCGAACCTACAGTCATCGACGAGGTTCGTTCCGGCACT TACCGCCAGCTCTTCCACCCTGAGCAACTTATCTCCGGCAAAGAAGATGCTGCTAACAATTTCGCTAGAGGACATTACACCGTTGGTAAGGAAATTGTGG ATCTGTGCCTCGACCGGGTTAGAAAGTTGGCCGATAATTGTACTGGCCTTCAAGGGTTCTTGGTATTTAATGCTGTTGGTGGCGGTACTGGATCCGGGTT GGGATCTCTCTTGTTGGAGCGTTTGTCTGTTGATTATGGCAAGAAATCGAAGTTGGGTTTCACTATTTACCCTTCTCCTCAGGTTTCAACGGCAGTTGTG GAGCCATACAACAGTGTTCTCTCCACCCATTCTCTCCTTGAGCACACCGATGTGGCTGTACTCCTGGACAATGAAGCCATCTATGACATCTGCAGGAGGT CCCTTGATATTGAGAGGCCCACTTACACCAATTTGAACAGGTTGATATCTCAGATCATATCATCCTTGACCACTTCATTGAGGTTCGATGGGGCTATCAA CGTGGATGTTACTGAGTTCCAGACTAACCTTGTGCCATATCCCCGCATCCATTTCATGTTGTCCTCATATGCCCCTGTCATCTCAGCTGCCAAGGCATAC CATGAGCAGCTTTCAGTGCCGGAGATCACAAATGCTGTGTTTGAGCCCTCAAGTATGATGGCCAAGTGTGACCCTAGGCATGGCAAGTACATGGCTTGCT GCTTGATGTACCGGGGAGACGTTGTTCCAAAGGATGTCAATGCTGCGGTTGGCACCATAAAAACCAAAAGAACTGTTCAGTTTGTTGATTGGTGCCCAAC TGGCTTCAAATGTGGTATCAACTATCAGCCCCCTACAGTTGTGCCTGGCGGTGACCTTGCTAAGGTGCAACGGGCTGTTTGCATGATCAGTAATAACACT GCAGTTGCTGAAGTGTTCTCTCGAATTGACCACAAATTTGATCTCATGTATGCAAAAAGAGCTTTTGTCCACTGGTATGTCGGTGAAGGGATGGAAGAAG GGGAGTTCTCAGAAGCCCGTGAAGATCTTGCTGCTCTTGAGAAAGACTACGAGGAAGTTGGTGCAGAGGGAGCAGAAGATGAAGAGGAAGGAGATGATTA TTGATCTCAAAATGTAAGACATTTTCATTATACTTTGTTTCCAAGATGAGGGTATGCTTTGTTACATCGCCCTACAACCTATTGTTTTTGTTAATCAATG TGTGATATAGTTTGGTCGTTCATACTGTGAAATAGTCAACATTATGCCTCTACTTGTTGATTTAGTATCGGTTCATCTGTTGTGTTGTTTGTGTCGACAA TCATATTAACTCGGAATTGTGCATCTCAAATGTTTATTTTCTTCTATTCACGTTTGCAAGTTACAATTTCTACTAGATTTCCATGTTAATCAAGCTGAGG CATTCAGCCCCACTTATTTCATACAGTATTTATGTTTCTTGACTTAAATTATAACTTTG
• Tissue: pods
• Gene name: LI_gene_145146;
• Additional information: details;

Expression of Ll_transcript_522713

FPKM

• PAB: 59.1
• PNAB: 67.3
• PS1: 37.6
• PS2: 36.5
• PS3: 38.6
• PW1: 33.5
• PW2: 21.9
• PW3: 12.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_522713

• Blastp: Tubulin alpha-3 chain from Eleusine with 96.89% of identity
• Blastx: Tubulin alpha-5 chain from Arabidopsis with 98.38% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019460937.1)
• Pfam: Tubulin/FtsZ family, GTPase domain (PF00091.24)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;