Ll_transcript_522721

• Id Trinity: TRINITY_DN46508_c2_g3_i6
• Name Transcript: Ll_transcript_522721
• Sequence: CCTAATGCCAACTACAGACATGATAGCCTCAACGACTCTTTTGCCGTCCACCTCTCATTTTGAACTAACCATGGTTAGGTTAATGACAGCAACGCTTAAC CTCAAAATAACCCTTATCTTTGATCCTCTCCTCTCCTATAAAACAAACCCGAATATCGCACATACTTCGCATTCTCTATTTTTTCTGAAGAAAGCGTCTT CATAAACGCTTTCGTTTTAAATCTCTTCGTTCTTTTTCAATTTCGAGTTTGAATTTTCTTTTCTGTTTAATCTTCGAAAATGAGGGAGTGCATTTCAATC CACATTGGTCAGGCTGGTATCCAAGTCGGAAACGCCTGTTGGGAGCTCTACTGTCTCGAGCATGGCATTGGGCCCGATGGACAAATGCCAAGTGACAAAA CTGTTGGTGGGGGTGACGATGCTTTCAACACCTTCTTCAGTGAGACAGGTGCTGGAAAGCATGTTCCGCGTGCAGTCTTCGTAGATCTTGAGCCAACAGT TATCGATGAGGTCAGGACTGGTACCTACCGCCAACTTTTCCACCCAGAGCAACTTATCAGCGGTAAAGAAGATGCTGCCAACAACTTTGCCCGTGGTCAT TATACCATTGGGAAAGAGATCGTTGATCTGTGTTTGGACCGTATCAGGAAGCTTGCAGATAACTGCACTGGTCTCCAAGGTTTCTTGGTGTTCAATGCTG TTGGTGGAGGAACTGGTTCTGGTCTCGGTTCTCTTCTGTTGGAGCGTTTGTCTGTTGATTATGGAAAGAAATCAAAGCTTGGGTTCACTGTTTACCCTTC TCCTCAGGTTTCAACGGCAGTTGTGGAGCCATACAACAGTGTTCTCTCCACCCATTCTCTCCTTGAGCACACCGATGTGGCTGTACTCCTGGACAATGAA GCCATCTATGACATCTGCAGGAGGTCCCTTGATATTGAGAGGCCCACTTACACCAATTTGAACAGGTTGATATCTCAGATCATATCATCCTTGACCACTT CATTGAGGTTCGATGGGGCTATCAACGTGGATGTTACTGAGTTCCAGACTAACCTTGTGCCATATCCCCGCATCCATTTCATGTTGTCCTCATATGCCCC TGTCATCTCAGCTGCCAAGGCATACCATGAGCAGCTTTCAGTGCCGGAGATCACAAATGCTGTGTTTGAGCCCTCAAGTATGATGGCCAAGTGTGACCCT AGGCATGGCAAGTACATGGCTTGCTGCTTGATGTACCGGGGAGACGTTGTTCCAAAGGATGTCAATGCTGCGGTTGGCACCATAAAAACCAAAAGAACTG TTCAGTTTGTTGATTGGTGCCCAACTGGCTTCAAATGTGGTATCAACTATCAGCCCCCTACAGTTGTGCCTGGCGGTGACCTTGCTAAGGTGCAACGGGC TGTTTGCATGATCAGTAATAACACTGCAGTTGCTGAAGTGTTCTCTCGAATTGACCACAAATTTGATCTCATGTATGCAAAAAGAGCTTTTGTCCACTGG TATGTCGGTGAAGGGATGGAAGAAGGGGAGTTCTCAGAAGCCCGTGAAGATCTTGCTGCTCTTGAGAAAGACTACGAGGAAGTTGGTGCAGAGGGAGCAG AAGATGAAGAGGAAGGAGATGATTATTGATCTCAAAATGTAAGACATTTTCATTATACTTTGTTTCCAAGATGAGGGTATGCTTTGTTACATCGCCCTAC AACCTATTGTTTTTGTTAATCAATGTGTGATATAGTTTGGTCGTTCATACTGTGAAATAGTCAACATTATGCCTCTACTTGTTGATTTAGTATCGGTTCA TCTGTTGTGTTGTTTGTGTCGACAATCATATTAACTCGGAATTGTGCATCTCAAATGTTTATTTTCTTCTATTCACGTTTGCAAGTTACAATTTCTACTA GATTTCCATGTTAATCAAGCTGAGGCATTCAGCCCCACTTATTTCATACAGTATTTATGTTTCTTGACTTAAATTATAACTTTG
• Tissue: pods
• Gene name: LI_gene_145146;
• Additional information: details;

Expression of Ll_transcript_522721

FPKM

• PAB: 10.7
• PNAB: 84
• PS1: 45.1
• PS2: 39.1
• PS3: 45
• PW1: 65.6
• PW2: 62.8
• PW3: 59.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_522721

• Blastp: Tubulin alpha chain from Prunus with 95.78% of identity
• Blastx: Tubulin alpha chain from Prunus with 96.53% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019427961.1)
• Pfam: Tubulin/FtsZ family, GTPase domain (PF00091.24)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;