Ll_transcript_521723

• Id Trinity: TRINITY_DN46509_c1_g1_i2
• Name Transcript: Ll_transcript_521723
• Sequence: GTCCATCTAGGTACATTAGCACAGCCAAGCCTATTCCACTGTCACTCTTTTCTCTCCCCATTCAATCTTCTCAATTCCCAGCACATCTCAAATAACAAAC AAACTTCACTTATCTCTCCACACTACAGAAACTACATCCACTTTCAATTCCTCAAATTCTCAACCTTTTGTCGTTACTTTTAAACTCATGTGCATTATTG TAAAAACACTAACATCACACTTAACCTCTCATACTTACACCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTTCTT CTTCTTGCTATGGCTTCCATTAACAACTTCAACCCTTTTGGTGGAAACTGGTTCCAAAAACCCCCAAACCCAATTCCACCCCTCAACACCAACATCTTCT CTCTCTCCGACCACCAAACTCCGAACTTCGCCGCCATCAGCCTCCGCAACCTCTTCCGCCGAAAGCCCAAACTCCCCGACGATGAACCGGGCCCAATGGA GCAAATGGTGTACCAGTTCTTCGAAGAATGTGAGAACCCACCAGACTATCGTCACACCCCAGAGGTAGAAAAGATTCTAAACGAAGACCCAATTTGGGAA AAGAGAGAAAACCCAACAGAAGAAGAGATAAGAGAAAACGAGGAAATGATTGAGATGATTAAGAATAGCCCAGTAGTGCAGTTTTTGCAGAGAGCAGAGG AAATTGCTGATAAGATCAATGAGATGGAGTTGAAGGAGAATGAGAGGCCTTACCATAAGGAAGATTGGGAAGTGTGGAAGAATGTGCCAAATGTGATTGG GCTTGATGGAAGGCCCATGCCTAGGAAAGCCCAGAAGAGTAGGAAAGAAGCTGATGACAAGTTTTGGGATTTTGCTAGACAGTTCTTTTTTGGGCTTTGG GGGTTTAGGCAGAGGCCTTACCCTGCTGGGAGACCTATTGATGTTGCTCAGTCAATTGGGTATAAGAATCTTGAGAAGCGCTATTATGATTTTATCATGA GGAGTGGCGGATGGTACTACAAGGATCGACTGGGTCGTACACGAGGACCATGTGAGTTGATTCAGCTTAAAACTGCATGGGGTGCTGGGATCGTTGATAA GAACACTTTTATTTGGGGCGAGGATATGGATGAATGGGCGCCTATCCACATGATTTACGGAATGGAGCGTGCAATTGCCACTTGGGAAGTTAGACTTGGT GCTGCAGCAACAGCCCTCCTTTTCAAACTGCAAAAAGGTATACCGCCATGGGTTCCGCTGAAGGGATTCGAAAAGAAGACTTATAAGCAGCTTCAAGAAG AGGCCATGGAAAGCAAGAGGCGTGATTTAGCAGTATTGGAAGCCAATGACGGTGTTTGGCCTGGAGTTAAAATTCCAAGTTATGCCCTATTTCTTTGGGC AAGTGGAACAGAACTGACTACTATTTTGGAACAGGATCAAATTAATCACATGCCAAACAAATACATTCCCAGAGATCTTAGAAAGAAGTTGGCCGAAATT ATACCAGGGTTGAGACCATGGGAGGTTCTGAGCATGGAACAAGCGATGGATCAAATAACATTTAACGGTGAGTGGTACCGTGAACCACTTGGTTCATACA CCACTGGTCCCCCATACATCCAGCACTGGAATGAGGACGTTTTGAGGTTGTATAAGATATATGAAGATCTTTCCGCCGAGTTGTATGAAAAAATGGAGAA GACACTTCCTGGCTTTGATAAAATTATGGAAAAGGTCCGGGTGGACTTTGATACAAGAATTAGCAAACTGGAGGAGAAGAAAGAGGCTGAGAAAAGAAGA CGTGAGAGAGAAAACTATGCCTAAAACATTCCCTCGTGTAATTTATTACATTGTTTCTGCATGTTATTGTAAGACATTGTTGTGAGTTGTTAAATGTTTA TGAATTTAATTACTTCGAACTCATGATTTATGATAAAGGTCTTATAGAATTCTTGGAATTCACTTAAGGAAAGGAAGAATTCAAACAATAAGTAGCAGAC ATTCTTATGAAGAAAGGAGTCTCATTACACAAGGAACAAGATACGAAAAACTGGGTAGAAAGATTACAATTTTCGGAATTGTAAAAAAACTGAAATTAAC TTATGCTACAAGCAACAGTATGGTGAAAGTCACTTAGTACGCTGTTGTTGGGGTTGATTGTCAAGTTTCTAAAATAAAGAAGGAGGTTAAATATTAGTAA TTGGAG
• Tissue: pods
• Gene name: LI_gene_145159;
• Additional information: details;

Expression of Ll_transcript_521723

FPKM

• PAB: 0
• PNAB: 6.6
• PS1: 6.4
• PS2: 7.2
• PS3: 8.3
• PW1: 6.4
• PW2: 4
• PW3: 3.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_521723

• Blastp: Protein TIC 56, chloroplastic from Arabidopsis with 67.55% of identity
• Blastx: Protein TIC 56, chloroplastic from Arabidopsis with 67.41% of identity
• Eggnog: NA(ENOG4111F7B)
• Kegg: Link to kegg annotations (AT5G01590)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019446533.1)
• Pfam: Domain of unknown function (DUF4339) (PF14237.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;