Id Trinity | TRINITY_DN46509_c1_g1_i21 |
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Name Transcript | Ll_transcript_521769 |
Sequence | GTCCATCTAGGTACATTAGCACAGCCAAGCCTATTCCACTGTCACTCTTTTCTCTCCCCATTCAATCTTCTCAATTCCCAGCACATCTCAAATAACAAAC AAACTTCACTTATCTCTCCACACTACAGAAACTACATCCACTTTCAATTCCTCAAATTCTCAACCTTTTGTCGTTACTTTTAAACTCATGTGCATTATTG TAAAAACACTAACATCACACTTAACCTCTCATACTTACACCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTTCTTCT TCTTGCTATGGCTTCCATTAACAACTTCAACCCTTTTGGTGGAAACTGGTTCCAAAAACCCCCAAACCCAATTCCACCCCTCAACACCAACATCTTCTCT CTCTCCGACCACCAAACTCCGAACTTCGCCGCCATCAGCCTCCGCAACCTCTTCCGCCGAAAGCCCAAACTCCCCGACGATGAACCGGGCCCAATGGAGC AAATGGTGTACCAGTTCTTCGAAGAATGTGAGAACCCACCAGACTATCGTCACACCCCAGAGGTAGAAAAGATTCTAAACGAAGACCCAATTTGGGAAAA GAGAGAAAACCCAACAGAAGAAGAGATAAGAGAAAACGAGGAAATGATTGAGATGATTAAGAATAGCCCAGTAGTGCAGTTTTTGCAGAGAGCAGAGGAA ATTGCTGATAAGATCAATGAGATGGAGTTGAAGGAGAATGAGAGGCCTTACCATAAGGAAGATTGGGAAGTGTGGAAGAATGTGCCAAATGTGATTGGGC TTGATGGAAGGCCCATGCCTAGGAAAGCCCAGAAGAGTAGGAAAGAAGCTGATGACAAGTTTTGGGATTTTGCTAGACAGTTCTTTTTTGGGCTTTGGGG GTTTAGGCAGAGGCCTTACCCTGCTGGGAGACCTATTGATGTTGCTCAGTCAATTGGGTATAAGAATCTTGAGAAGCGCTATTATGATTACACTTCCCAG ATGTTTTTTTGCATACAAAAATGTTTCCGCTAAGCGCAATGGTCAAGAGGTCACGTGTTCAAATCCTAGAAACAATTTCTTTGCTTGTGCGAGTAAGGCT TCAAACATCTAAACTCTTCAGGAGCATCATGCATTGGGCCTCCCTTTTTACACCATTTGGAGATGTAGGTGGTGTAAGCCTGGAAGGAATAAAGAGATGT GATGGTAAAAGGAAAAGAGAAATTGAAAAAAAGAAGATAAGGTTTAAATGGCAGTGTATGAGAAAAACATGTAGAAATATAAGTTATCATGAGGAGTGGC GGATGGTACTACAAGGATCGACTGGGTCGTACACGAGGACCATGTGAGTTGATTCAGCTTAAAACTGCATGGGGTGCTGGGATCGTTGATAAGAACACTT TTATTTGGGGCGAGGATATGGATGAATGGGCGCCTATCCACATGATTTACGGAATGGAGCGTGCAATTGCCACTTGGGAAGGTTTCTTAAGTTCCATTCT TTTATTTAGCTTATGCATAGAGCAATTGAAGCTAATTCAGTCGAAAAAGTTTCCAAATGTTCTTAAATAAATCAATTAATATTTATCAACAAATATTTTT TCGCATCTAAGAATGCCATCTATAAAACCAAACTGGCAAGCCTTGAAGCTTTAGTACTTGATAAAAACTGATTTCTGGTTCGGCATTTTTTTAGTTAGAC TTGGTGCTGCAGCAACAGCCCTCCTTTTCAAACTGCAAAAAGGTATACCGCCATGGGTTCCGCTGAAGGGATTCGAAAAGAAGACTTATAAGCAGCTTCA AGAAGAGGCCATGGAAAGCAAGAGGCGTGATTTAGCAGTATTGGAAGCCAATGACGGTGTTTGGCCTGGAGTTAAAATTCCAAGTTATGCCCTATTTCTT TGGGCAAGTGGAACAGAACTGACTACTATTTTGGAACAGGATCAAATTAATCACATGCCAAACAAATACATTCCCAGAGATCTTAGGTATGTGCTATATG GCTATATGCTAAGACCCTTGTGTTATAAACAGAGTGACATGCAATAGTAATGAATTATTATTACTATATTTAGAAATTTGATATGGTTTCTAACTATTCG TCCCCTGTCCCGGACACACCCCATTAAAATAGAAAGAAGTTGGCCGAAATTATACCAGGGTTGAGACCATGGGAGGTTCTGAGCATGGAACAAGCGATGG ATCAAATAACATTTAACGGTGAGTGGTACCGTGAACCACTTGGTTCATACACCACTGGTCCCCCATACATCCAGCACTGGAATGAGGACGTTTTGAGGTT GTATAAGATATATGAAG BLAST |
Tissue | pods |
Gene name | LI_gene_145159; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_521769
Blastp | Protein TIC 56, chloroplastic from Arabidopsis with 61.02% of identity |
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Blastx | Protein TIC 56, chloroplastic from Arabidopsis with 60.68% of identity |
Eggnog | NA(ENOG4111F7B) |
Kegg | Link to kegg annotations (AT5G01590) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019446533.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |