Id Trinity | TRINITY_DN46509_c1_g1_i4 |
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Name Transcript | Ll_transcript_521732 |
Sequence | GTCCATCTAGGTACATTAGCACAGCCAAGCCTATTCCACTGTCACTCTTTTCTCTCCCCATTCAATCTTCTCAATTCCCAGCACATCTCAAATAACAAAC AAACTTCACTTATCTCTCCACACTACAGAAACTACATCCACTTTCAATTCCTCAAATTCTCAACCTTTTGTCGTTACTTTTAAACTCATGTGCATTATTG TAAAAACACTAACATCACACTTAACCTCTCATACTTACACCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTTCTTCT TCTTGCTATGGCTTCCATTAACAACTTCAACCCTTTTGGTGGAAACTGGTTCCAAAAACCCCCAAACCCAATTCCACCCCTCAACACCAACATCTTCTCT CTCTCCGACCACCAAACTCCGAACTTCGCCGCCATCAGCCTCCGCAACCTCTTCCGCCGAAAGCCCAAACTCCCCGACGATGAACCGGGCCCAATGGAGC AAATGGTGTACCAGTTCTTCGAAGAATGTGAGAACCCACCAGACTATCGTCACACCCCAGAGGTAGAAAAGATTCTAAACGAAGACCCAATTTGGGAAAA GAGAGAAAACCCAACAGAAGAAGAGATAAGAGAAAACGAGGAAATGATTGAGATGATTAAGAATAGCCCAGTAGTGCAGTTTTTGCAGAGAGCAGAGGAA ATTGCTGATAAGATCAATGAGATGGAGTTGAAGGAGAATGAGAGGCCTTACCATAAGGAAGATTGGGAAGTGTGGAAGAATGTGCCAAATGTGATTGGGC TTGATGGAAGGCCCATGCCTAGGAAAGCCCAGAAGAGTAGGAAAGAAGCTGATGACAAGTTTTGGGATTTTGCTAGACAGTTCTTTTTTGGGCTTTGGGG GTTTAGGCAGAGGCCTTACCCTGCTGGGAGACCTATTGATGTTGCTCAGTCAATTGGGTATAAGAATCTTGAGAAGCGCTATTATGATTTTATCATGAGG AGTGGCGGATGGTACTACAAGGATCGACTGGGTCGTACACGAGGACCATGTGAGTTGATTCAGCTTAAAACTGCATGGGGTGCTGGGATCGTTGATAAGA ACACTTTTATTTGGGGCGAGGATATGGATGAATGGGCGCCTATCCACATGATTTACGGAATGGAGCGTGCAATTGCCACTTGGGAAGGTTTCTTAAGTTC CATTCTTTTATTTAGCTTATGCATAGAGCAATTGAAGCTAATTCAGTCGAAAAAGTTTCCAAATGTTCTTAAATAAATCAATTAATATTTATCAACAAAT ATTTTTTCGCATCTAAGAATGCCATCTATAAAACCAAACTGGCAAGCCTTGAAGCTTTAGTACTTGATAAAAACTGATTTCTGGTTCGGCATTTTTTTAG TTAGACTTGGTGCTGCAGCAACAGCCCTCCTTTTCAAACTGCAAAAAGGTATACCGCCATGGGTTCCGCTGAAGGGATTCGAAAAGAAGACTTATAAGCA GCTTCAAGAAGAGGCCATGGAAAGCAAGAGGCGTGATTTAGCAGTATTGGAAGCCAATGACGGTGTTTGGCCTGGAGTTAAAATTCCAAGTTATGCCCTA TTTCTTTGGGCAAGTGGAACAGAACTGACTACTATTTTGGAACAGGATCAAATTAATCACATGCCAAACAAATACATTCCCAGAGATCTTAGAAAGAAGT TGGCCGAAATTATACCAGGGTTGAGACCATGGGAGGTTCTGAGCATGGAACAAGCGATGGATCAAATAACATTTAACGGTGAGTGGTACCGTGAACCACT TGGTTCATACACCACTGGTCCCCCATACATCCAGCACTGGAATGAGGACGTTTTGAGGTTGTATAAGATATATGAAGATCTTTCCGCCGAGTTGTATGAA AAAATGGAGAAGACACTTCCTGGCTTTGATAAAATTATGGAAAAGGTCCGGGTGGACTTTGATACAAGAATTAGCAAACTGGAGGAGAAGAAAGAGGCTG AGAAAAGAAGACGTGAGAGAGAAAACTATGCCTAAAACATTCCCTCGTGTAATTTATTACATTGTTTCTGCATGTTATTGTAAGACATTGTTGTGAGTTG TTAAATGTTTATGAATTTAATTACTTCGAACTCATGATTTATGATAAAGGTCTTATAGAATTCTTGGAATTCACTTAAGGAAAGGAAGAATTCAAACAAT AAGTAGCAGACATTCTTATGAAGAAAGGAGTCTCATTACACAAGGAACAAGATACGAAAAACTGGGTAGAAAGATTACAATTTTCGGAATTGTAAAAAAA CTGAAATTAACTTATGCTACAAGCAACAGTATGGTGAAAGTCACTTAGTACGCTGTTGTTGGGGTTGATTGTCAAGTTTCTAAAATAAAGAAGGAGGTTA AATATTAGTAATTGGAG BLAST |
Tissue | pods |
Gene name | LI_gene_145159; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_521732
Blastp | Protein TIC 56, chloroplastic from Arabidopsis with 63.49% of identity |
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Blastx | Protein TIC 56, chloroplastic from Arabidopsis with 65.22% of identity |
Eggnog | NA(ENOG4111F7B) |
Kegg | Link to kegg annotations (AT5G01590) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019446533.1) |
Pfam | Domain of unknown function (DUF4339) (PF14237.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |