Id Trinity | TRINITY_DN46510_c0_g1_i6 |
---|---|
Name Transcript | Ll_transcript_522803 |
Sequence | ATCATTAACTATTCGAAACGCAAACAAAATTACATGAATTTGCAATCGTCGTTCATTCCTAACTTGTGATTTTGGATAACAAAACGACACTCACAGAGGG TTTTCTTTTCACTAATCACTACTCACTCTAGGGTTTCCAATACTCTATTCTCCTATTCAAAGTTATCGCCTTTTTCTTCTCAATTGCTAGGGTTTCTATT TCATTCACTTCAACCGGTTTGGTTGATTTGCTTTCTTTACATGTATAATTCGAGAGGGAACGGTGCTTATGGCCAATCTTACACGGGTCAATCCGCTTAT GGCCAAAACCTGGGTGCTAATTATTCTGGGGCTTCTGCTGGAGGACACGATGCGGGACAGCATTCTGTGGCCGGTAGGCATTCAACAATATTAGGAGCTT CTCAGGAAGCTGATGTTGCTGGGTATAGGCCTCATACTTCTACTGCTGCACAGTATGGCGGACAGTATAGTTCTGTTTATGGATCAGCTTCTCTAAACAG TGCGCAACAGGTTCCTTCTATGGGTATCAAGGCTGCTGCATCATCAGCTTTAGATGGCCGTGGAGGTTATTCTTTGGGTGTTTCAGATTCACCGAAGTTT GCTTCTGGAGATTATGTCCCATCCTCCAGCCATGGATATGCCCACAAATCTGATCAAATGTATGGTGACAAGGGTTTGGATTATTCTGGAATAGACAGGC GGCAGTATGGTGAAAGGCAGAGTGCTTACACTGGTAGGGATATACCAAGTGATCTAGCTGGACGGTATGCGGCTGATCCTGTTGGCTTCAGTCATCAACA TCAGCAAGCAGAAATATATGATCGCATTGACCAGGCAGCTTTGCTTCGACAAGAGCAATTGCTGAAAGCTCAATCTCTGCAGGGTGCCTCACATGACGGA GGTGCAAGGTACATTTTTTAAAATGAGTGTTCATTAAATTTTTGTGTAATGCAGCTAAATATCAACTGAAACTGAATTTGGTCACTTGCTGATAATAATA TTTTATGTTAAACAAATATTTTAACCTTCCACTCTTGTGCTTTGTAAGTAAAGTAGTTGGGTTGTCTTTTCAATTTCTGATGAAACTGGCTTGAAGCTGA TCAACAATTCTATGTTGAATGGTATTAATATTTCTCCCTACACTGAGTGCCAAACGTTTCTGGCAGACAAGCTGATTATCTTGCAGCAAGAGCAGCTGCT AGTCGTCACCCTACCCAAGACCTTATGTCTTATGGAGGAAGGATGGATTCTGATCCCCGTGCTCCATCAATGCTAAGCGCTGCTTCATACAGTGGACAAC ATGCACCATCAATATTAGGAGCAGCTCCAAGGAGAAATGTTGATGATCTCTTGTATTCTCAGAATGCTTCAAATCCTGGTTATGGAGTGAGCTTGCCTCC TGGTAGGGATTATGCCAGTGGGAAAGGGCTTCATGGAAATGCCATGGAGTTGGATTACCCAGGAGTTGATCGCAAGGATGACCGAGCTAGCTATTTACGA GAATTTGAGCAAATGGAAGAAGAGCGTCGGCGGGACCGCCTACGTGAGAGAGATAGGGACAGAGAAAGGGAGAAAGAACGAGAACGCTTGCAAGATCGTG AACGAGAAAGGGAACGTGAAAGGAAGCGCATTTTGGAGCGGCGGGAGAAGGAGAAGGCTAGGGAGAAGGAACGAGAACGAAAACGTGCACTTGAAACTAA GAATGAAATAACTCCAGTCAGACCTTCGAAGGGTCCTCGTAGCACTTCAAAGGATCCGCGTAGCACTTCAAAGGGTCCCCGTAGCACTTCAAAGGATCCC CGTAGCACTTCAAAGGATCCCCGTGCGTCATCTTTGTCAAAGGATGGGAGATCTTCACGACGTGACTCACCACATCGCAGCACATTGCATAGGCACCATT CACCTGTTAAAGAAAAACGGAGAGAATATGTCTGCAAGGTTTACCCATCTAGTTTGGTGGATATGGAGAGGGATTACCTCTCACTAGATAAGCGGTATCC CCGACTCTTTGTCACTCCTGAATTCTCCAAGGCTGTTGTCTACTGGCCAAAGTGCAACCTGGAACTATCTATACGTACTCCTGTCAGTTTTGAGCATGAT TTTTTTGAAGAAGCAAGTTCTATTGAGCCTAGCCACTCATCCAACAAACTTTTGATGGGTCCAGCTACAAGTTCAGAACCGGGAAATACAGTTTGGAATG CTAAAATAATTTTAATGAGTGGACTTAGTAGGACTGCATTGGAGGAGCTGTCATCTGATAAAGTTTTAGATGACCGAGTTCCTCATATTTGCAACTTTCT TAGATTTGCTGTCCTTAAGAAGGACCATGCATTCTCGGCAGTTGGTGGTCAATGGGAACCTGCTGATGGGGGCGATCCATCTATTGATGATAATTCTTTG ATCAGAACGGCCCTAAGATATGCAAAAGATGGTATTCAACTTGATTTGCAGAACTGTAAACACTGGAACCGCTTTCTTGAGATACATTATGATAGAATTG GCAAAGATGGTTTCTTTAGCCACAAGGAGATCACTGTTCTTTATGTTCCCAATTTGTCTGACTGCCTCCCCTCGCTGGAAGAATGGTGTAACCAGTGGCT TGCCCACAAGAAAGCAGTGGCTGAGAGAGAACGTCAATATTCTTTGAAAAAAGAGAAGTCAAGAGATACCAATGAAGCATGTAAAGACAAAACAGATAAG GATTCTGCTGCAACTGGAAAGGCCACCGATATTAAAAAAAAGGAGAAAGATAGCAATAACGTTAAACAAGAAACTGGAATGATTGACAATAAAATTGCTA AAATTGAAGGCTCTGACATTGCTGAAGAAGGCAAGAGTGCTGAAAAAAAGCAAGGTGAAACTGCCATTGGTCAAACCACAGGCAGCGTGAAATCAGTGAA AAAGAAGATTATAAAGAAGGTTGTGAAACAGAAAGTGGTCAATAAAGCAAATCATACTACCGGAAAACAATTGGACAAAGTGGATGAGAAGGAAGGTTCA GGGAAAATGGCAACATTGAATGTTCCTGTTCTGGTGGACAAAGCTTCTGTGGATACTCCTGGGGTTAAAATTTCTGATAAAAGCATAGTTGCTGTCGCTG TTTCAGCGAGGAAAAGTGATGGGAATGAGGAGAAAGTTAATGAAATTAATAACTCCAATGATAAACCTCTAGAAAAATCAGAAACAATAGTGGCAGTAGG CGAGGCCACTGTGAAAACAATAAAAAAGAAGAAAGTTATCAGGCGGGTCCCTAAAAAGAAGGTTGTTGGTGAAGCATCTAATTCTGTAGTTTCTGCCCCT AACACTGCTGGAGGGAGTGTAGTGGCAGTTCAAGCACAAGACAACACCCAGAGCATTACCAAGCAGAAATCTGATGCAGATGCTACAGTGAATGAGGTGA AGAAAACAGTAAAAGTAGTTGCAAAGAAGAAGCTTAAAACACCTACCCCTGCAAAGCAAGACAATACATCTGATTCCATTAAAACGGAGTCAAAGTCTGA CAAAAAGGATGAAGTGAATGCTGTGGCAATTAAAGAACAAAATGACACACACAGCCCTGGCAAGTCAACTGTTGATGCAGATACCACAGTGACAGAGGCA AAGAAAACTGGGAAGTTAGTTCCTAAGAAAAAGTCAAAGGCATCTACCTCTGAGAAGCAAGATGGAGTAGCTTCTGAGAAAGATATTAAAAATGATAAAA AGGATGAAAAAGCAATTGGTGAAAAAAGTGGTTCAAAGACAGATAAGCCAAAGGCCTCTGAGAAAGATATTAAAAATGGCAAGGGGAAACTGAAAGACGA GGATAAGTCAAAAGATGGGAAAGAAACAAAAGAGAGAGGTGGAAAAGATGATCCTAAAAGCAAATCCAGTAAAGAAGTGAAAGAGAAGAGAAAGTCCGAT GAACCTCCTCGACATCCTGGATTTATAGTTCGTCCGAAATTGACTAAAGATTCTAAACTACGCTCACTAACATTGTCACTGGATGCATTGTTGGATTATA CTGATAAAGATGTTGAAGATTCTACACTTGAGCTTTCCTTGTTTGCGGAATCATTTTATGAAATGCTTCAGTTTCAAATGGGCCGTAGAATATTGACATT TCTTCAGAAACTGCGCACAAAATTTGTGATTAAAAGAGCTCAGCGAAAAAGGCCACGAGAAGATGGCGATGAGAAAGAAAATGTAAAGAAGTCATCCACA AAGCGTCAAAAGGGAGATGAGAAGGATAGTGTGAAGAGCGAGCCCGCTAATGCAGACACATCAAATCCAACCCAAGGAGATGATGAGAAAGGTGAGGAGA AAACTATTGCTGATAATGATAACTCCAGTGATAAGGAGGCTGATGTGAAGATGGAAGAAGGAACAGACGAGGAAGAAGATCCAGAGGAAGATCCTGAAGA ATATGAGGAAAAAGAGGATGGTAGTCCCCAACACGACTCATCCACTGATAAAAAGAATGTTGAGCAAGATGCCAATGTCAAAGTTGAGCCTGAAAGTATG ACCAGCAATGAAAAAGCAGCTGATGAAACTTCAAAAGGGGAAACTAAGGTCAAAGAAGAGGTTAAGGAGGAATCCAAGTCTGATGCAAAGATTAATGAAG AAAAGGTTGATAAAAATAAGAAAGAACCCCCGGTTAAGGAGGTTACTGTGGACAGAGAATTATTGCAGGCTTTTCGATTCTTCGATCGCAATCGTGCTGG GTACATTAGGGTTGAAGATATGAGATTAGTTATCCACAATCTGGGGATGTTCCTTTCTCACAGGGATGTCAAGGAACTTGTACAAAGTGCATTGTTGGAG AGCAACACTGGGAGGGATGATAGAATTCTTTACAATAAGCTGGTTCGGATGAATGATCTTTGATAGGTTCTGATCTGTTCTCTTGAAGACTAAAGTTGCT GATTAAAACTTGAATCTTTTCTCCAATTTAAAATAAAGTTAGACATGTGTTTTCTTCTTTTGCTGGAAAGGACATGAGCCTTTTAGTAAATTGGATTGTG TTTATGTAACTTGCCTTGTGTTTTACTCAGTTGCTCAAGATTTTATGTTATGTTTGGAGTTTTAAGAAGGAACAAAAGAAGTTTTAATGATGGAATTGAA ATTATTTAATAATTGTGTTTTGACTTTTGAAATTGTAAAGAATATAAACGGATG BLAST |
Tissue | pods |
Gene name | LI_gene_145168; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_522803
Blastp | Cell cycle and apoptosis regulator protein 2 from Homo with 28.26% of identity |
---|---|
Blastx | Cell cycle and apoptosis regulator protein 2 from Homo with 28.26% of identity |
Eggnog | kiaa1967(ENOG4111FW4) |
Kegg | Link to kegg annotations (57805) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019460839.1) |
Pfam | DBC1 (PF14443.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |