Ll_transcript_521154

• Id Trinity: TRINITY_DN46523_c2_g1_i1
• Name Transcript: Ll_transcript_521154
• Sequence: TTCAAATACATTACACTCTGTTTTGCCACAAAAACCCTCGTGGGTTGAATCCTCCCACTCAAGATAAGGCGTGTCTTCTCTCAAGCTTTCTATGTCTTCT ACTTCTCTATTTAATACTCTATCAATTTTAATCGAAAGGTTTTGCTTTTAATTCTTATAGGAATCTCATAGAGCAACCTCTCATTTTCGGAGTTACTGAT TTCCCTTCATATAAAGAGGGAACTGAAAAAGATTATACACAATTTTTTGATTGAATTGCATGGTCACACTTTTTGATTAATTTGTTTTTATTTGAGAATA AGATTTTACATTATGGAAGGATTATTGAATCCTTTGCTTAACCAAAATTGTTTAAACCCCTTTGGTTTCAATACAAGACTCAGTTATACTTTCCCATTGA TCACAAGAACTCGGCATTTACATCTAAAACTTCACTCTTGCATCCTTAGAAGTAATTACACGCGTTTAAGTAGAGATGCTGGTACTACTAGGTTTAGAGG AGCTGTTATTGCTGCACTTGATAGTGATGATAAAGGAGAGGGATCTAATATTGACTGGGAAGCGGAGTTTGTTGGGGAACTCGATCCGTTTGGTTACCGA GCTCCTAAGAAGAGGGCGAAAGAACAGAAGTCGAAGTTGCTTGAAGACACTGATGGGATGGATTGGTGTGTTAGGGCAAGAAAGGTGGCACTTAAATCGA TTGAAGCCAGGGGTATGACTCGTACGATGGAAGATTTGGTTTCTGTTAAGAAGAAAAAGAAGAAGCCTAAGAAGAGTTTGGTAAGCAAGAAGAAAACTGT TAAGAAAATGGAGGATATAGAAGAAATTCTTGATTATGGTTCAGATGAAGAATTGGGGATGCCACAAACGATAGAGGATCTGGATGATGTTGGTGATTTG AAAAGGAAAGTGAGCTTGATTGGTGATGGAATGTATGCCGAAAAGACCGAGAAAGCGATGGAAGAGTTTGTCAATAAGCTGTCCCAATTCTCTGGTCCGT CTAACCGTAGAGAAGAAATCAACTTGAACAAAGAAATTGTAGAAGCACAGACTGCGGAGGATGTGTTGGAAGTTGCTTCGGAAATAATCGTTGCAGTTGC AAAGGGCCTAAGCCCTTCACCCCTTTCCCCTTTGAACATTGCTACTGCTCTTCATCGTATTGCTAAGAATATGGAGAAAGTTACTATGATGAAAACTCGA AGGCTGGCATTTGCTCGACAAAGAGAGATGTCTATGCTTGTGGGAATTGCAATGGCAGCCTTACCTGAATGTTCTGCTCAAGGAATCTCTAACATAGCTT GGGCATTGTCCAAAATTGGAGGCGAGCTGATTTATTTTTCAGAGATGGATAGAATTGCAGAAGTTGCAGTGACAAAGGTCGCGGAATTCAATTCTCAAAA CCTTGCTAATGTTGCTGGTGCTTTTGCTTCAATGCAGCATGCTGCTCCTGATCTTTTCTCAGAACTGTCAAAAAGGGCTTCAGAGATAATTCACACCTTC CAAGAGCAAGAACTTGCACAGCTTTTGTGGGCTTTTGCATCTCTATATGAGTCCGCTGATCCTATATATGACTCTTTAGACAGAGTCTTCAAAGATAATT GCCAATTGAAAAGCTCCATCGGTGAAAAGACATCAAGTAATCATGAACAGATAAATGTTGATATAAGTGAACCCTCAAATGGATCTTCGGTCTCTCCTAT ACTCACTTTAAGTAGAGACCAGCTTGCGACTATTGCTTGGTCCTATGCAGTCTTTGGACAAATGGATAGGAGTTTCTTCTCTTATGTTTGGAAAACGCTG AGCCATTATGAGCAACAAAGGATTTCAGAGCTGTATAGGGAGGATATCATGTTTGCTTCTCAGGTTCATCTTGTAAACCAGTGCTTAAAGCTTGAATTCC CTCACCTTCAGCTGTCTTTAAGTGGTGAACTTGAGGACAAAATTACCCGGGCTGGAAAAACAAAAAGGTTCAATCAAAAAATAACCTCGTCATTTCAGAA AGAGGTTGGACGTCTTCTTGTTAGTACTGGTCTTGAATGGGTCAAAGAATATGTTGTGGATGGATACACTTTGGATGCTGTGCTAGTTGATAAGAAGGTT GCTCTGGAGATTGATGGTCCTACTCATTTCTCTAGAAACACTGGCGTCCCTTTAGGGCATACTGTCCTTAAACGTCGATACATTACTTCTGCTGGTTGGA AAGTTGTGTCAGTATCCCATCAAGAGTGGGAGGAACGCCAAGGGGCATTTGAACAAGTGGAGTACCTTAGAGACATTCTCAAAGATCATTTAAATGAAGG GTATGTGAACACTACATTGACTGAGGTGAAGTAATCATCCAATGCTTGCTGTTTATGTAGTATAGGCAGATATATATATATATATATATATATATATATG TTTGAGTTAAGTTATTCTGCTCCATTGACTGAAG
• Tissue: pods
• Gene name: LI_gene_145226;
• Additional information: details;

Expression of Ll_transcript_521154

FPKM

• PAB: 6.8
• PNAB: 5.6
• PS1: 6.8
• PS2: 1.8
• PS3: 0
• PW1: 6.8
• PW2: 5.9
• PW3: 3.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_521154

• Blastp: RAP domain-containing protein, chloroplastic from Arabidopsis with 65.51% of identity
• Blastx: RAP domain-containing protein, chloroplastic from Arabidopsis with 65.51% of identity
• Eggnog: RAP domain(ENOG41121F0)
• Kegg: Link to kegg annotations (AT2G31890)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019460999.1)
• Pfam: RAP domain (PF08373.9)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;