Id Trinity | TRINITY_DN46523_c2_g1_i6 |
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Name Transcript | Ll_transcript_521160 |
Sequence | TTCAAATACATTACACTCTGTTTTGCCACAAAAACCCTCGTGGGTTGAATCCTCCCACTCAAGATAAGGCGTGTCTTCTCTCAAGCTTTCTATGTCTTCT ACTTCTCTATTTAATACTCTATCAATTTTAATCGAAAGGTTTTGCTTTTAATTCTTATAGGAATCTCATAGAGCAACCTCTCATTTTCGGAGTTACTGAT TTCCCTTCATATAAAGAGGGAACTGAAAAAGATTATACACAATTTTTTGATTGAATTGCATGGTCACACTTTTTGATTAATTTGTTTTTATTTGAGAATA AGATTTTACATTATGGAAGGATTATTGAATCCTTTGCTTAACCAAAATTGTTTAAACCCCTTTGGTTTCAATACAAGACTCAGTTATACTTTCCCATTGA TCACAAGAACTCGGCATTTACATCTAAAACTTCACTCTTGCATCCTTAGAAGTAATTACACGCGTTTAAGTAGAGATGCTGGTACTACTAGGTTTAGAGG AGCTGTTATTGCTGCACTTGATAGTGATGATAAAGGAGAGGGATCTAATATTGACTGGGAAGCGGAGTTTGTTGGGGAACTCGATCCGTTTGGTTACCGA GCTCCTAAGAAGAGGGCGAAAGAACAGAAGTCGAAGTTGCTTGAAGACACTGATGGGATGGATTGGTGTGTTAGGGCAAGAAAGGTGGCACTTAAATCGA TTGAAGCCAGGGGTATGACTCGTACGATGGAAGATTTGGTTTCTGTTAAGAAGAAAAAGAAGAAGCCTAAGAAGAGTTTGGTAAGCAAGAAGAAAACTGT TAAGAAAATGGAGGATATAGAAGAAATTCTTGATTATGGTTCAGATGAAGAATTGGGGATGCCACAAACGATAGAGGATCTGGATGATGTTGGTGATTTG AAAAGGAAAGTGAGCTTGATTGGTGATGGAATGTATGCCGAAAAGACCGAGAAAGCGATGGAAGAGTTTGTCAATAAGCTGTCCCAATTCTCTGGTCCGT CTAACCGTAGAGAAGAAATCAACTTGAACAAAGAAATTGTAGAAGCACAGACTGCGGAGGATGTGTTGGAAGTTGCTTCGGAAATAATCGTTGCAGTTGC AAAGGGCCTAAGCCCTTCACCCCTTTCCCCTTTGAACATTGCTACTGCTCTTCATCGTATTGCTAAGAATATGGAGAAAGTTACTATGATGAAAACTCGA AGGCTGGCATTTGCTCGACAAAGAGAGATGTCTATGCTTGTGGGAATTGCAATGGCAGCCTTACCTGAATGTTCTGCTCAAGGAATCTCTAACATAGCTT GGGCATTGTCCAAAATTGGAGGCGAGCTGATTTATTTTTCAGAGATGGATAGAATTGCAGAAGTTGCAGTGACAAAGGTCGCGGAATTCAATTCTCAAAA CCTTGCTAATGTTGCTGGTGCTTTTGCTTCAATGCAGCATGCTGCTCCTGATCTTTTCTCAGAACTGTCAAAAAGGGCTTCAGAGATAATTCACACCTTC CAAGAGCAAGAACTTGCACAGCTTTTGTGGGCTTTTGCATCTCTATATGAGTCCGCTGATCCTATATATGACTCTTTAGACAGAGTCTTCAAAGATAATT GCCAATTGAAAAGCTCCATCGGTGAAAAGACATCAAGTAATCATGAACAGATAAATGTTGATATAAGTGAACCCTCAAATGGATCTTCGGTCTCTCCTAT ACTCACTTTAAGTAGAGACCAGCTTGCGACTATTGCTTGGTCCTATGCAGTCTTTGGACAAATGGATAGGAGTTTCTTCTCTTATGTTTGGAAAACGCTG AGCCATTATGAGCAACAAAGGATTTCAGAGCTGTATAGGGAGGATATCATGTTTGCTTCTCAGGTTCATCTTGTAAACCAGTGCTTAAAGCTTGAATTCC CTCACCTTCAGCTGTCTTTAAGTGGTGAACTTGAGGACAAAATTACCCGGGCTGGAAAAACAAAAAGGTTCAATCAAAAAATAACCTCGTCATTTCAGAA AGAGGTTGGACGTCTTCTTGTTAGTACTGGTCTTGAATGGGTCAAAGAATATGTTGTGGATGGATACACTTTGGATGCTGTGCTAGTTGATAAGAAGGTT GCTCTGGAGATTGATGGTCCTACTCATTTCTCTAGAAACACTGGCGTCCCTTTAGGGCATACTGTCCTTAAACGTCGATACATTACTTCTGCTGGTTGGA AAGTTGTGTCAGTATCCCATCAAGAGTGGGAGGAACGCCAAGGGGCATTTGAACAAGTGGAGTACCTTAGAGACATTCTCAAAGATCATTTAAATGAAGG GTATGTGAACACTACATTGACTGAGGTGAAGTAATCATCCAATGCTTGCTGTTTATGTAGTATAGGCAGATATATATATATATATATATATATATATGTT TGAGTTAAGTTATTCTGCTCCATTGACTGAAG BLAST |
Tissue | pods |
Gene name | LI_gene_145226; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_521160
Blastp | RAP domain-containing protein, chloroplastic from Arabidopsis with 65.51% of identity |
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Blastx | RAP domain-containing protein, chloroplastic from Arabidopsis with 65.51% of identity |
Eggnog | RAP domain(ENOG41121F0) |
Kegg | Link to kegg annotations (AT2G31890) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019460999.1) |
Pfam | RAP domain (PF08373.9) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |