Ll_transcript_522520

• Id Trinity: TRINITY_DN46530_c1_g1_i10
• Name Transcript: Ll_transcript_522520
• Sequence: TATCCATGTATCTAATAACAGTGAATATCAAATGTGTACTGTGTTCAGAATCAAAGTTCTATAGTTCTGTTCTGTCTATGTTGTTCGGCTTTTAGATTGA TTCAACAAACAACACTGATACAAAATGCAGGCTTCAATTGCATGCTCTTCACTTCCACATAGAAATATAGTTCTTCCACCAACCCTTTCTCCCAAACCTA ATTCTACTTTTACTTTCTTGTCTCTAACCAAATCATCCTCTTACTTCACACCAAGATGCACATTTCAACCTCAACCATTACAAATCTCATCACCTCCATC AAAATCAGTAAGAGTTTCAAGGTCTAAAGTTACTCCACTTCTGTGCGGCATTTCGTCGAACGGGTACAGTGCAAATGAAGGTAGGAGTATTAGGGAGTGG GTTGAGGTGGTCGGTGATGCGATTTCAACTGCATTTCCGTTGTGGGTAACAATTGGGTGTGTTTTGGGGTTGATGAAACCAAATTCTTTCAATTGGGTCA CTCCACAAATGAACATGGTAGGCCTCATTATCGTTATGCTTGGTATGGGTATGACTCTCAGTCTTGAAGATCTTCGTGGGGCTCTTTCTATGCCTAAGGA AGTTCTCTCTGGCTTTTTTCTTCAATATTCGGTTAGTATCTGTGCTTTTTTATTTATTTCTTCTTTGTTTATTTTCTATGTACTATGCTAGTAAGATGTA AGTGAAGAAGTCCTATGTTGGAAACGAATATATAAATTTAAGGTTGTATTGATGTTATGAGATTTTAAGTTGTGATAATGCCCAATTAAAAGAGGGCGAG TTTCGGGTAACTGTAAAATTGTTGCTCAGTGACAATAAGGTAATGAGTTCAAATCATGGAAACAGTCTCTTCATTTGCGGAGGTAAGACTGCATATATCT AACCTTCCCAAAGGACACTGAGTGGGAGCCTTGTGCCTTGAATTGCCCTTTATTAATCCCACTTAAACAGTTCATTAATCGGATATAAGAAATAGTTTAC TTTTATATAATCCAACATCTTTTATTTTAAAGTCAATGATGTTTAATGCATGAAAGCTAGATGATAGGTTGACAATGTAAAAAACCTTAAGGTTGTCTGT CACCACCATTTTTCTCATAAGGTAGACACACATACTAGATGTGGCTAGTTCACTTATCGGTTTTCACTTGCCTTTTTTCTCCGTGTTGGAGATTTTGTTG TTTACCATTTCTTTTAAATAATATTGATGTCTAACAAAAAAGTGGCACCTTTGTATTTATGTGTCAAAATTTATCAACCGAAAATGAAAAAAATAAACAA ACCAAACAACATCTTAGTTTGTTTTGTTGACAATGGAGATTTTAGTTAATCATGGGTGCAACACAGCATGATTTTTCATATTATTGATGGAATTTATATT TATATGGTTATGCAAATACATGGAGATGACTATGAATCTATGATAGCAAGATATGAAAGTGCACCTTCTTTTACCTATATACTATGGGTCATTTATGTTG ATGAGGGGTCGTTTTTTTCTGTGTGGATTTCTAACAATTTTTAGGTGATGCCATTATCTGGATATTTTATAAGCAAACTCTTAAATCTTCCACCACATTA TGCAGCAGGATTAATATTAGTTGGTTGCTGTCCAGGAGGCACAGCTAGTAATATTGTCACTTATCTTGCACGTGGAAATGTCGCACTTTCTGTGATAATG ACAGCTGCAAGTACTGTATCAGCCGTGGTTAGTCCTCTCTTTGTTTTCTTCTTTGATGTGCAATTATGATGATAAAAGTGTGATACCTTTTCATGGAAGG ATTTGCAATCAATTACAAATGGCACCATATGGATTTTTCAAATTCAAATGAAACTGTTGGATGAATTCTGTCTTTAACACGTAGTGGTTGATTACAATAA GTAATTTTAAGAAGTAGAGAAGAAACCATTCTCGGGAATAAGATTTTGTATGAAACATACCATTTTGCCTCTGGATTGATGGTAACAAAAATTCTGTGTT TCATTTGCTTCCCAGATTTGAAATTGGTCAGAAGTCTAGGTTATTTACGGAAATCAACTTATATATTTTCTACATATTTATGTGCTGAGGTATAAATGAT TCTTATTTCTTCCCGTTGTTATTGTACATGTTAGTGTTTGATTATTTTTCCTTTGTTTAGTTGAAAGATAGATATTATCTGGAACATAAAAAGGTTTTAA ATGAAAACCGATGCAATATTAATGGGACTTTTTCATGTGCATTATATCTTAAGTCGTCAACAAACTTCTCAAGCACCATATGGAAGGAAGTATCCTATTA GAATGATCTGCAAATATTCTATACAGTATATACTTTTGTATTGGGCATGTGACATGCCATTCTTTATTTGACATTTTTCCGTTCAAAAATGTAGTTGTTA CGTTAACGTCAAATAGTCCTTTGTTAACTATGCAAATGTCGATTGGTTGAAAACTTAATGTTGCAGGTCCTGACTCCTTTTCTGACAGCCAAACTTGCTG GTAAGTTTGTAGCTGTGGATGCAGCTGGCTTATTGATGTCAACATTACAAGTTGTGCTCTTACCTGTATTGGCCGGTTCAATTCTGAATCAGTATTTCCA ACCTCTTGTTAAACTTGTCTCTCCATTGATGCCACCCATGGCTGTAGCAACTGTCGCAATTTTGTGCGGAAATGCAATTGCCCAGAGTTCTTCTGCCATC CTTATGTCCGGCGGACAAGTAGTTTTAGCATCATGCATTCTTCATGCTTCTGGCTTTTTCTTCGGTTACATACTTGCAAGGTTTCTCGGGATAGATGTGT CATCATCCCGAACAATATCCATCGAGGTTGGAATGCAGAACTCAGTGCTTGGGGTTGTTCTGGCTGCTCAGCACTTTGGAGATCCCCTAACTACAGTACC CTGTGCTGTTTCAAGTGTGATTCACTCAGTCTTTGGTAGTATCCTAGCAGGAATTTGGAGACGCTCTGTGCCTGCTGAGAAGAAGAAGGACTGATATATA TTGCTGGACAAGGTTGATTTATGGAGTGTAATATCTATACACTGTTAGTATAAAGATTTATGCACAGTCAGTATATCATTCACCGTTCGTTTATATTATT TTTTGTGAAGAGTCAATGTTAATTAAAAATGAATGGTGAATAATAGGCTGACTGTATATGAAATTTTTACACTGTGAGTGCATACATTTTTCTTTCTAAT GTGTATGTGCATATGATTGTTTCATTGGTGACTTGTATTAGTTTCTAGTCACCAATTAAAATGAATTTTGTCAAAGTCCTTCATAATATTTTCAAATAAC ATTTTAACTTCATCCTAGCAACCAAGCAAGAGTAGCATGCCAAGCAGCATATGAACAAATATCTTATTATATCAGCAAATAAAATGGAA
• Tissue: pods
• Gene name: LI_gene_145261;
• Additional information: details;

Expression of Ll_transcript_522520

FPKM

• PAB: 0
• PNAB: 0
• PS1: 0.3
• PS2: 0.2
• PS3: 0
• PW1: 0.3
• PW2: 0
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_522520

• Blastp: Probable sodium/metabolite cotransporter BASS1, chloroplastic from Arabidopsis with 76.61% of identity
• Blastx: Probable sodium/metabolite cotransporter BASS1, chloroplastic from Arabidopsis with 76.61% of identity
• Eggnog: bile acid(COG0385)
• Kegg: Link to kegg annotations (AT1G78560)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019456961.1)
• Pfam: Sodium Bile acid symporter family (PF01758.15)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;