| Id Trinity | TRINITY_DN46530_c1_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_522511 |
| Sequence | CAAAGTTTTGGGAGTCACCGAAATAATATGCTTTTGCTGGCGTCCCGCATTTGTTTGAAATTTAAGGTTTTCGAAGTTTCTGAAACAATTATAGAAACCA TTATTTAAAACCTTGTCTTCTTCTCATTGATCAGCAAGATGGTGTCAATCTATGATCTTCATATCTGTGCTGCTAGTAGATTGAACAACGCTCTGGGAAA AAAATGCAAACCTTAATTGCATGCTCTTCACATTCACATGGAAAAGTGCAATCACACACTAACCTTGTTCCAGTAATCATTTTTCCCAAACACAACTCTA ATTTGTCTCTAACCAGATCATCTTCTCACCTCATCCTACAATGCAAATTCCAACCTCAACCCTTCTTTAACTCATCAGCTTTAGTTCCCACATCAAAATC ACCCATAATTTTTACCTCCAACGTTAGTCCACTTCTGTGTGGCATTTCGTCGAACAGGTACAGTGCAAGTGGAGGTAGGAGCATTGGGGAGTGGGTTGAG TTGGTTGGTGAAGTACTTTCAACAGCGTTTCCTTTGTGGGTAACGGTTGGATGTGTGTTGGGGTTAATGAGACCAAGTTCTTTCAAATGGGTCACTCCAC AATTGAATATTGTAGGCCTCACCATAGTCATGGTTTGTATGGGGATGACCCTCTCTCTTGATGATCTTCGTGGGGCTCTTGCTATGCCTAAGGAAGTTCT TTCTGGGTTTGTTCTTCAATATTCAGTGATGCCATTATCTGGATATTTTGTAAGCAAACTCTTAAATCTTCCATCACATTATGCAGCAGGTTTAATTTTA GTTGGGTGCTGTCCAGGAGGCACAGCAAGTAATATTGTTACATATCTTGCACGGTATGTTGATTCTCAGAACTGTTATTTCAAACAATGCTTTTAGCGGA TTTCGTGAGCTAGATGATCTAATGACCTGTTTGTTTTGCTAGCGGAAATGTGGCGCTTTCGGTGATAATGACAGCTGCAAGCACTTTATCAGCTGTGGTC ATGACTCCTTTTCTGACAGCCAAACTTGCCAGTAAATATGTAGCCGTGGATGCCGCTGGCTTATTGATGTCAACATTACAAGTTGTGCTCTTGCCTGTAT TGGCCGGTTCATTTCTGAATCAGTATTTCCAACCTCTTGTTAAGTTTGTCACCCCAATAATGCCACCCATGGCGGTAATAGCTTCGGCGATTTTAGGTGG AAATGCAGTCGCCAAGAATTCTTCAGGAATCCTTATGTCTGGTGGACAAGTAATTCTAGCGTCCTCCCTTCTTCATGCTTCTGGCTTTTTCTTCGGTTAC GCACTCACAAGGATGCTTGGGCTAGATGTATCATCGTCCCGAACCATATCCATCGAGGTTGGCATGCAGAACGCAGTGCTTGGGATTGTTCTGGCTACTC AGCACTTTAGAGATCCCTTAACTGTAGTGCCTATTGCAGTTTCAAGTGTGTGTCACTCAATCTTTGGTAGTATCCTTGCTGGAGTTTGGAGATGCTCTGT GCCTGCTGAGATGAAAGACTCAAAAATCTAGTTGGACAAGGTTTTGCATGTAATTAGGACTGTTTCTTTGCTGGCTTGAAAATAGTTTCTGGTCAGCATG TAAAATGCATCTTGGATATCAAAGTCCTTCTATTATAGTATTTTCAAGTAGTGGAAGTTTCATGTACTGGACATCTCTTTATGTTCAACATCATCCTTGC AACCAAGTAGGAGGCATGCAAGTGTAAAGTTCCAAATGCTGTGTGTATATCATTTACTGAAGTTATGTTTATAAATTTTATAATTAAACAAATCAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_145261; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_522511
| Blastp | Probable sodium/metabolite cotransporter BASS1, chloroplastic from Arabidopsis with 72.83% of identity |
|---|---|
| Blastx | Probable sodium/metabolite cotransporter BASS1, chloroplastic from Arabidopsis with 73.2% of identity |
| Eggnog | bile acid(COG0385) |
| Kegg | Link to kegg annotations (AT1G78560) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019443834.1) |
| Pfam | Sodium Bile acid symporter family (PF01758.15) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |