Id Trinity | TRINITY_DN46536_c0_g1_i16 |
---|---|
Name Transcript | Ll_transcript_521542 |
Sequence | AGCAACTTCTACAACTTGAGCAATTTCTCTCTCTAACATCATAAACTAACAACAACAAACGAAGAAGATGAAGAACAAATTCATGTTCGTGTTTTAAAGA ACGATTCACCCACAATTTTCTCTCACCTCCAAATACCCTTCATTATTTCTCACAGTGGAGTGATGATTCATGCATGACACTACTTTGCTCCTCTCACTGA TGTTAACACGCTGGTAATGCTTTTTCTCTCTGCTTGTCTGACAAGGGTTTGGTTATAGTCTTTAGCACTTAGAAATGGATTTAGAAGAGAAGTTCCTCGA TAAAGTGAGGTATAGCTTTGGAGAAGAATTGTGGCTATGGGTTGCATAAAGTTTCTGGTATTCAAAGCCTTTTATACAGTGTGCGAAGTAATCCAGAAAA AATAGTAATTCAGATTATGCTTCAAAGAGCTCAGAACTCCTTCAGTGGTTCCTGAAATCTGGTCCAAAGAAAGAACATCTTCGAACACGCTCTTATACGA CAAAAATACGCTCTGGTCGAAAGCAAGATGCATGGAAATAAGTCGAAGAATCAGGACTCTAAGAAAGTTTCTTTTCTCAGCAATCAGCCTTCTAGGAAGC AACATCGGAAGGGGGAAAACCCCATGCGATTCATACTAGATCCTGAGGTGCCTTCTGGTTTTGGACAATCAAACTCCTGGATCTGTAAAAATTCTGCTTG TCGAGCAGTTCTATCTAAAGATGACACATTTTGTAAAAGGTGCTCTTGTTGTATTTGCCACCATTTTGATGATAACAAGGACCCTAGTCTTTGGTTGGTA TGCACATCTGAGTCTGCTCAAGGGAACTCTTGTGGGTTGTCTTGCCATATCGAGTGTGCCCTTCAACATGAAAAAGCGGGAGTTGTCGATCATGGGCAGC TAATGCAATTAGATGGTGGTTATTGTTGTGCATCCTGTGGCAAAGTGACTGGGATAATTGGATGTTGGAAGAAGCAGCTAAGTATAGCAAAAGATGCTCG GCGTGTAGATGTACTATGTTACAGGATATATTTGAGCTACAGGCTTCTGGATGGCACTTCAAGATTTAAAGAATTGCATGAGATG BLAST |
Tissue | pods |
Gene name | LI_gene_145320; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_521542
Blastp | VIN3-like protein 1 from Arabidopsis with 66.91% of identity |
---|---|
Blastx | VIN3-like protein 1 from Arabidopsis with 66.91% of identity |
Eggnog | protein VERNALIZATION INSENSITIVE 3-like(ENOG410YBTS) |
Kegg | Link to kegg annotations (AT3G24440) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019448395.1) |
Pfam | PHD - plant homeodomain finger protein (PF07227.10) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |