| Id Trinity | TRINITY_DN46538_c0_g2_i1 |
|---|---|
| Name Transcript | Ll_transcript_521100 |
| Sequence | CTTAATTAGTTTCTTAATTGGTTATCTTTTGTTGTTTATACTCTATATGCAATTGTCCTGTGTTGATTCTACTGTATTATATGCAATTGTCCTGTGTTCA GTTATTTTCAATAGATTTGTTTTGTATGATTTTAGGAATTGTATTATCTTTTACATTAAAAAAGTAAAATTATTCAAAAAAAATAAAGTGAATGTGTTGG TCATGTAACATGACCCATGGCCATGGATAATGAAGCTATGCCTTAGAATTTCGTTTCTGTCAATTGCATTTTTTTTGTTAGATTCAAATTCAATAATTGA TACACTAGTTTTGCAATTAATAAAATTGATTTCTGTTGGTGACATTTAATTTATTTTATAGTTATAAAGTGATGAAGAGTAATAAGAAGGAAAAGTCGGC AGCAACAGGGAATGGTGGAGAAGACATGGGGTGTGTAATCCATGAGCATGCCCTGTTCTTTGATACGTTGGTTGAACTCATACCTGCCAAGTTTTATCTG CCAACTGATGATAATGAGAAGCCATGGTTTCAAGGTCTCAGCAAGGCTGCGAAATCCAAGAAGAAGAAAGAAACAAAGGAAAACATTAAGAAGTCTCGTA GGGACCGGATGGACCCGGAGAAACCCCCTACAAGTACGCTTGACCTGCTTAAGCAAAGTTTAGGCAAAGAAAAGGCAAATGACAGTGGGCTGGAAGGAGA TGATCGCTCTGTGACTTATGAAGAACTTCGGCAAAGGCTTCATCGCAAACTTGATGAGTTTCGTTCAGGTCGTAACTGTGCAAATCCGGAGGAGAAAGCT AAGAAAAGGGATGATAGAGATGCAAGGAGGGGGTATGGGGACAAGAAACGCAAGAGGGATAGTGGGAATGAAGATAGTAAACTTGCTCCTCATGAGTTGG CAGAGGAAGTGAAGAAGGATGCTGCTGAGGCTTCCAAAGAGCTTGTGTTTGGCCATGTCAAACTAAATGATGAACTGCAAGGGAAGAAGAGGAAAGTTTC GAAGTATAAGGAACTTGAAAGGGCAAAGAAATTGGAGGAAGAACAGAAGAAAGATCCTGAGAAGGGTGAAGCTTTTGCTAAAAAAGAATCATGGAAAGCA GCAATGAGTAGAGCTTCAGGGATTAAGGTCCATGATGATCCCAAACTGATACAAAAAAGCATACAGAAGGGGAAGAAGAAGCAACAAAAAAATGCTGAGA AATGGAAGGACAGAATTCAAACACGGGACCAATTGAAGGCAGAGAAGCAGCAAAAAAGGTCAAAAAATATAGCTGATAGGAGTCAAGATAAGAAAATGCG TAAAATTGCAAAGAGAGAGAAAAAGCTTTTGCGGCCTGGTTTTGAAGGTCGCAAGGAAGGTTTTATTAATGAAGGTGCCGGCTAACATGGGTCCAAAGTT TGTTGATTTTGTCTTTTCATGTTATTATCTTTTGTCCTGAATGAATCAGAGTGTGACCATTTAGAGGGAGATGTCTACAAGTTTCTATTTGATGTTGTTG ATTTTCTAAAATTAACACTTCATATATTTTATTAAGCATATGGCATACTTCGCCAATTCAGCAATGTTACTATTTCTGTTCATCACTGGATTTCACAGGC ATTTTGTTCAGGAAGTAGACGACCTTTGTGATGAGTAGGTTCCAGAATCGTATAAATGTATGTACAAAATCATATCCGGGATAGATAGCAACTGTGACAG CTTATAAACATAACAGGCGAGAGATGAACACTTACTAATGGGATAATGAATATCATTGTAACTCTGGCACTCTCACCCTTATCTGCATTCTATTTCTGTC CCTTCAGGAAAAGTACTAGTTAATGTCATTTGACGGCAAGTTACCCAAGTGGAGTCGTTTGACCTCACAATTACCACTTTGGTGTAAGTTGTAAAATATT T BLAST |
| Tissue | pods |
| Gene name | LI_gene_145330; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_521100
| Blastp | Surfeit locus protein 6 homolog from Sophophora with 38.37% of identity |
|---|---|
| Blastx | - |
| Eggnog | surfeit locus protein(ENOG4111G0Y) |
| Kegg | Link to kegg annotations (Dmel_CG4510) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019415906.1) |
| Pfam | 60S ribosome biogenesis protein Rrp14 (PF15459.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |