| Id Trinity | TRINITY_DN46545_c1_g2_i5 |
|---|---|
| Name Transcript | Ll_transcript_521559 |
| Sequence | TTTTTAATCACATAAAATTCCCATATTCTCCTTCTAGAGAGAGAAAACATTAGATAGATACAGAAAGGGTTGTAGGATAGAGAAAAAAATTATTCTTTTT TGTGCTCCAATGGTTCAACTGGGAACCCAAAGTGGAAAAAATTAATCTTTTTTTGATGGGTCGTTCCGAATCTATGATCTTCTGAAAACCCACAAAGCGA TCTTCGTTTTTTTGATGCACTCATAGGATTTGCCGATTATTGATTTATTCACTCGATAAACTTGTTTCGTGGCCGTTGATTTCGACGACGCAAATGAACG GTGCCGATGAGGTCGTCGCAGCTCCGGCGGGTCCACCAAACCCTCTGGATTGGAAATTCTCGCAGGTTTTCGGAGAACGTACGGCAGGGGAAGAGGTTCA AGAAGTGGACATAATTTCTGCTATTGAATTTTGTAAGTCCGGTGATTATCTTGCTACTGGTGATCGTGGTGGTCGAGTTGTTCTCTTTGAAAGGACAGAT ACAAAAGATCATGGTGGATCAAGAAGAGATTTGGAGAGGATGGAGTATTCTATTAGCAGGCATCCTGAGTTCCGTTATAAAACAGAGTTTCAGAGTCATG AGCCTGAGTTTGACTATCTTAAGAGTTTGGAAATAGAAGAGAAAATCAACAAAATCAGATGGTGCCAAACAGCTAATGGTGCCCTCTTCCTTCTTTCTAC AAATGATAAAACCATAAAATTTTGGAAGGTTCAAGAAAAGAAGGTCAAGAAAATTTCTGAGATGAATGTCGACCCTCCGAAAGGAGTGGGAAATGGCTCT ATTGCTAGTTCAAGCAGTTCCACAATCCATCTTGCAAATGGAGGATCTCCAGAAAGATCACACAACTATCTAAGCAATGACTTTTCATTTCCCCCAGGAG GCATACCATCGCTAAAATTACCCACGGTAAGTAGCCATGAAACCAGCTTGGTTGCTCGATGTCGTAGAGTATATGCTCATGCTCATGATTATCATATCAA TTCCATTTCAAATAACAGCGATGGTGAAACATTCATATCAGCCGATGACTTGCGAATAAATCTTTGGAACCTGGAAATTAGCAATCAAAGTTTTAATATT GTTGATGTAAAGCCTGCAAATATGGAGGATCTGACGGAGGTTATAACATCAGCAGAATTTCACCCTACACATTGTAATACATTGGCATATAGCAGTTCAA AGGGTTCAATTCGTCTCGTCGACTTGCGGCAGTCAGCATTATGTGATTCTCATGCCAAAATATTTGAGGAACAAGAGCCCGCTGGGTCCAGATCATTTTT TACCGAGATTATTGCGTCTATCTCTGACATAAAGTTTGGGAAGGAGGGAAGATATATACTTAGTCGTGATTACATGACTTTAAAGGTTTGAAAGCTATAT CATTCCGAAATCCATGCTTCTGTGACTAATGCTTTTCTCAGTATTGTCGATAGGGATACTTTAAATTCATTGAATCGATTTCCATGAGACATTGGCATTT GTTATAAGTGGTATGATTTGTGGTTAGGATGCAATTATGCAAGAAGCTGTTAATCTTTCAAGTTTCATCTCACCTTCTTTATGTGTCAGTTATGGGACAT CAATATGGATTCCGGCCCCGTTTCAACGTTCCAGGTTCATGAGTATTTAAGACCGAAGCTTTGTGATTTATATGAAAACGATTCAATTTTTGATAAGTTC GAGTGTTGTCTGAGTGGTGATGG BLAST |
| Tissue | pods |
| Gene name | LI_gene_145400; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_521559
| Blastp | Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform from Arabidopsis with 80.93% of identity |
|---|---|
| Blastx | Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform from Arabidopsis with 80.6% of identity |
| Eggnog | protein phosphatase type 2A regulator activity(COG5170) |
| Kegg | Link to kegg annotations (AT1G17720) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019458560.1) |
| Pfam | WD domain, G-beta repeat (PF00400.31) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |