Ll_transcript_520366

Id TrinityTRINITY_DN46552_c0_g1_i2
Name TranscriptLl_transcript_520366
SequenceTTAACATCTCACATTCACAAATCAAGCAGTTGGGTGCTTGATACAGGTGCAACAGACCATGTTTGTTGCAACCTATCAGCCTACCAAAATTACAAAAGGA TAAATCATCTCTCTATCATTTTGCCTAATGGCAATCATCTATTTTACCTTAATGGTGTGTTATATGTGCTTATCTTTAACTTTAACTTAATATCTATATT CAGGCTTACCAATTCTCTAGGCTGCAAAACTGACTTTCTCTACTAATCATTGTGAAATTCAGGACCAACTCTCCTTGAAGATGATTGGTGTAGCTGAATT GAGGAAGGGATTGTATTTTCTAAGTCAGCTCAGCAAGACTCATGCCAAGCCTCACACTGTAAATGTTTACACTTCATATAATGATGACAATTTTTGGTAT GCTAGATTAGGACACCCTTCACACAAGAAATTGCAACATTTACAAACTATTTTTCCTTTCATTAAGTGTACCAAAACACATGATCCCTGTGAAGTTTGCC ATCTTGCTAAACAAAAAAGATTATCTTACTCTCATAGTGTTACTAAATCTGCATTTGCTTTTGATCTCATACATATAGATATATGGGGACCTATTTCTAC TCCTTCTACTTTTGGTCATAAATAATTTCTTACTATTCTTGATGACAAAACCAAATTCACATGGCTTTTTTTCATGAAACAGAAAGGTGAAACCAGTCAT CTCATAAAAGGTTGTTACTTATGTTGAAACTCAATTTGACACCAAAATTAAAATGATTAGATGTGATAATGGAAAAGAGTTTCTTATGAAAGATTACTTC TCTCAAAGAGGTATTAGTCATCAAACTTCTTGTGTTGAGACACCTCAACAACATGGTATTGTTGGAAAAAACACCAACACATTCTTGGTGTGACTAGAGC TTTAATGTTTCAATCTAATATACCTCGTTGTTATTGGAATTATGTTGATGCCTATGTTGTTCACTTGATTAATAGACTTCCTACTGTTTTTTGTCTAACA AATCATCTTTTGAGGAATTGCATAATTTGTTGCCTAACTTGACTGATTTGAAAGTTTTTGACAGCTTGTGTTATGGCTCTACTTTAGTTGGACATAGACA TAAGCTTGAGCCTAGATCTAGACAAAGTGCCTTCCTAGGATTCAAACAAGGCACTAAAGGCTACATTCTTCTAGACCTGAAAACTAATGAGATATTCTTA TCTAGGAATGTAGCTTGTTATGAACACATTTTCCCTCAGTAGTATGAATTCCAACCATCACAAAACCTATACTTCACCTTTTGACCAAAACCAAGATTGT AGACATGATTTTAACCCTCACAATACCACTTCCCTTGATCACTCTAGAGTTATTGAAACTGATTCTGAGCCTATAAGCATCACTATGACAGAAATTGACA CTAGTATTGTGTCTGTTGAGTCTGAGCCTAGAAGCATCACTAGGACAGAAAGTTGATACTAATACTATGCACAATTCTGAGTCATCTAATGAATGGACTT GTGATAGTCAGATTGATTCCAATAGTAACCCAACTGACTCGAATTGTGACCAAACTAGGCTTCCTCAGGAAACCAATCTTTATGAGTCTGATCATGTTTC TTTACCCCTTAGGCAATCTCATAGAATAAGAGGTCCTCCTACATACCTAAAATATTACCACTGCACCCTTATGCACAAAAGAATTCCTTCAATTGATCAC ATTAAGTATCATATCAATAAGAATCTCAACTATGATAAATTGTCTTCAAAGCATAAAGTGTTTTCTCTTGCTATAAGTATGCATGATACTCCAAAGAGCT ATGCAGAGGCTATCAAAACTCCTCACTGGCAAGAAGCAATCAACTCAGAATTACAAGCCTTAAGCAGAAACAACACTTGGATCCTGACTGAACTACCATA AGACAAGAAAGCCATAGGATGCAAATGGGTCTTCAAGTTGAAGCACCATGCTGATGGATCAATTGAAAGACACAAAACAAGGCTAGTGGCAAAGGGCTTT AACCAAAGAGAGGGAGTTGACTACATGGACACTTTTAGTCCAGTAGTTAAGATGACAACCATAAGAGTGTTGTTGTGCTTGGCATCTATCTACAATTGGC ATTTGCATCAATTGGATATCAACACTGCCTTCCTTCATGGTGATCTCAAAGAATTTGTCTACATGAAAGCACCACAAGGTCTTCAAGTCTCAAATTCCAG AATTGTCTGCAAACTACAAATATCCATCTATGGATTGAAGCAAGCTAGTAGGCAATGGCATGACAAGCTCAACAACATTCTTCTGCAAATTGGTTATACC AAATCCTTTGCTGGCCATTCTTTATTCGTTAAGAACACTAATAATGGCTGTACAGCCATTCTTGTTTATATTGATGACTTGGTTTTGACAGGTAATGACA TTAAGGATATCATGAACACCAAGACAATTCTACATGACAAATTCAGCATAAAGGATCTTGGAGAATTGAAGTTCTTTCTTGGGATGGAAGTTGCAAGATC CAAAAGGGGGATCATTCTATATCAAAGAAAATACACCCTGGATCTCTTGGAGGAAACTGGCTTCCTTGGTGCTAAACCAGCTTCAACCCCTATGGAGTAT AACAACAACCTGCATTCTCAATCTGGTTCTCCCTTACCAGATGATTCCTCCTACAGAAGACTGATTGGAAAGCTTTTATATTTGACCAACACTCGACCAG ATATCTCTTATGATGTTGGAGCTCTAAGTCGATTCCTTTCTTCCCCTACCAATCTTCACTACAAAGCAGCAACAAGGGTCCTTCGATACCTTAAACATTC ACCTGGTCAAGGAATTTTCTTTCCTGCTCAGAACACTGCTTGCATTCAAGGGTATTCAGACTCAGATTGGGCAAAGTGCATTGATACTAGGAGGTCTATC ACTGGATGGTGCTTCTTCTTGGGTAATGCTTTGATCTCATGGAAAAGCAAGAAACAAAACATTGTTTCCAGATCTTCTTCTAAAGCAGAGTATAGAGCAC TTGCCATGGCAGTTTGTGAAGCTCAATGGCTGCTTTTTCTGTTCAGAGATCTTGGAATTCAGCATGACAAACCTGTGAGCATCTTTTGTGACAACAATTC TGCTCTTCATATAGCTGCAAATCCAGTGTTTCAT BLAST
Tissuepods
Gene nameLI_gene_145449; 
Additional informationdetails; 

Expression of Ll_transcript_520366

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_520366
BlastpRetrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 37.37% of identity
BlastxRetrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 38.03% of identity
Eggnog-
Kegg-
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019455059.1)
PfamReverse transcriptase (RNA-dependent DNA polymerase) (PF07727.13)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;