Ll_transcript_520860

• Id Trinity: TRINITY_DN46558_c1_g1_i5
• Name Transcript: Ll_transcript_520860
• Sequence: ATCATACTCTATTCTATAAATATAAATCTTTATACTCATCAAGATACTTTATCTCAAACACAATCTTTTTGTGTCTTCCATAGTTTTCTTTCAATTTCCA AGCTTCTCTCAAAACATGGGTTCTTCCAACAACCAAACCATTTTGGTAACAGGGGGTGCTGGTTTTATTGGCACTCACACTGTTGTTCAGCTTCTCAATG ATGGTTATAATGTTTCCATCATTGACAATTTCGATAATTCTGTTATGGAAGCTGTTCACCGTATCAGAGAGGTAGTTGGTCCTCAACTTTCTAACAACCT CGAATTCACCCAGGGTGATCTTAGGAATAAGGATGACTTGGAAAACTTATTCTCCAAAAAAAAGTTTGATGCAGTTATCCACTTTGCTGGTTTAAAAGCT GTTGGAGAAAGTGTTGCAAATCCAAGACGGTATTTTGATTTTAATTTGGTCGGCACCATAAATCTCTATCAAGTTATGGCAAAGTATAACTGTAAAAAGA TGGTTTTCTCATCATCTGCAACCGTTTATGGCCAACCTGAAACGATTCCTTGTGTGGAGGATTTCAAATTACAAGCCATGAATCCCTATGGAAGGACCAA GCTTTTCCTTGAAGAAATAGCTCGAGATATTCAGAAAGCTGAACCAGAATGGAAGATTATTCTGCTAAGATACTTCAATCCAGTTGGAGCACATGAAAGT GGTAAACTTGGTGAAGATCCAAGGGGAATACCAAATAACCTTATGCCTTACATTCAGCAAGTAGCTGTTGGAAGATTGCCTGAACTCAACGTATACGGTT ATGATTATCCGACCAAGGACGGCTCTGCGGTTAGTAAATTTTGTGCATATGCTGCACTTTTATTTTTACATCATCATCAAATAATGAGAATAACTGTAAT GTTCCAACCGGGCAAGGCATTTATTAGAAATGTGCTAGGTTAGACTAATGGTTAGGTGTAAAAATCATCAAATTGAAGTTGCATTGCTATTATGTTGCCT TTACCACGATTAAGGATAATTGCGGGAAATTTTGGCCGATGCGGCCATGACGCTGTTGTGGAAGCTCATGAAATCGCAATTTATGGCTGTAATTGTGGTT GCGGAAAGCAAATTATAACACTGAATCTGGTAACATATGTTTCTTTACCCTGCTTTCTTTTTATCTTGTTCAAATTTAGGTCCGGGACTACATCCATGTG ATGGACTTAGCCGATGGTCACATTGCAGCCCTGCGAAAGCTTTTCACCACGGAGAACCTAGGTGAATTATCTCTTACTCTATTTATATAAATCAATATGG ACAATCTTGTTTTTTCCCTGTAAGACTTTTTGGTATTTGTTGCAGTAGGTTTGTGGACAAAATGTAACAAATTGTTGTTGTTCAGGTTGTACTGCTTACA ACCTAGGAACTGGTCATGGTACATCTGTGCTTGAAATGGTTACAGCATTTGAAAAAGCTTCTGGCAAGGTAACTACGCATTTACACACACATGTTTGTAT ATGTGTCTTTGATTGTGTGCAAATGAATATGAAGGAAATGACCACATCCAAAAATTCTGATTTTGAATTGGGTATTCAATTTTCAGAAAATTCCAATAAA ATTGTGTCCAAGGAGGCCAGGAGACGCAACTGAGGTTTATGCATCTACTGAAAAAGCTGAGAAAGAACTTGGTTGGAAGTAAGTACTTCATTTCATTCTT TGATGCTTAACAAGTGATGCTTAAATTGGCCATATTGTGGTTCATTGCTATTACATGGGTCATTTATTTTACCTTGTATTATTTTATTTTATTGGATTGT CAATATTAATAGTCTTACTTGATCCGTAAAGATTTATATATAGTCAATGTATTATGTATCATTTATTTGTACTAGTTTTTGTTGAATAGTGAATAATAAT CAAATATGAATGATAAATTATAGAGTGAGAATATATAAAACTCTTATATTATCGGTGCATACATTTTTTTAATAAATAATTTGGGTATTTGATTTCAGGG CAAAATATGGCGTGGAGGAGATGTGCAGGGACCAATGGAATTGGGCAAA
• Tissue: pods
• Gene name: LI_gene_145490;
• Additional information: details;

Expression of Ll_transcript_520860

FPKM

• PAB: 12.3
• PNAB: 0
• PS1: 0.6
• PS2: 0.3
• PS3: 0.2
• PW1: 0.4
• PW2: 0.6
• PW3: 2.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_520860

• Blastp: Bifunctional UDP-glucose 4-epimerase and UDP-xylose 4-epimerase 1 from Pisum with 88.7% of identity
• Blastx: Bifunctional UDP-glucose 4-epimerase and UDP-xylose 4-epimerase 1 from Pisum with 88.7% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019446602.1)
• Pfam: short chain dehydrogenase (PF00106.24)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;