Ll_transcript_520863

Id TrinityTRINITY_DN46558_c1_g2_i1
Name TranscriptLl_transcript_520863
SequenceCAAAATTATTATTCACCTGTGACAAACATATAGTTTGAAGTCCTACAGCAGTAGAACTGTTTCATTTGAGTCCAACCCAAATACCCAATGACTCCAACAT TGTTCCAAACACTTTTTCCAATACCAATGCTTCCTTCTTATGCATTACCATTACCCATCCTTCCACCATTCAAAGCAAAATCAACCCATAATTGCTTTTT CCACCCCACTTTTCATAATGCCAAGAAAAGTCACAAACTTGAACCACCCCAATGTTCTAAACACTCTTTTGTTTCAACCCCTGACCACAACTTTCTTGAT GAATGGCCTCACCTTCTTCAATTCTCAATTGGGTCACAGGATTATATGCTTGCTCAGGCAATTCATGCCTCTCTCATTAAATTTGGTTCCGTAGGTGACC TGTTTGTGGATAACAATCTTGTCAACCTTTACTCGAAATTCGATAAAATGGTTGATGCACAGAGGATATTTGATGAAATGCTTGTTAGGAGTACTGTCAC TTGGACTACCCTTATGAAGGGGTATTCGAGGAATGGTGATTATGAGTCGGTTTTCAATTGCGCGTGAGTTGTGCATTTGTGGGGAGAAGTTCAATGAGTA TACTTGCACGGTGGTCCTGCAGGGATGTAAGTCCCCGCAAGACTGTGTTTTTGGCAAGCAGATTCATGCATTTGTTCTCAAAAATGGGTTTCATGAGAAT GTTGTTGTGGCCACTTCTTTGGTTTCTATGTACTCTAGAAGTGGCCACTTGGATCATGCAGAAAAAGTGTTCCGTGGTGTAAGTGTCGTAGATGCTCAGT GTATAAATTATATGATGTTGGAATATGGCAAGGCAGGCTTGGGGAATAAGGCATTTCAGATATTTGTGGATATGCTGAACTCTGGTTTGAACCCAAGTGA TTATACGTTCACGAATTTGATAAGTGCGTGTGTTTCAAGCATAGGACTCGACCGAGGAAAGCAGCTACATGGGCTTGCCGTGAAGTATGGTTTTATGTGT GAAACATCTCTTGGAAATGCAACAATTACAATGTATGGGCAACATGGGATGATCGAAGAGGCTGAGAGACTGTTTCTTGAAATGGATGGGAAGACTTTGA TTACTTGGTCTTCACTTCTATCAGCATTTGTTAAAACCGGCTATGCTAACAGAGCCCTTGAGTTTTTCTTAAATATGCTTGAGATTGGTATGCCTCCTGA TTCTGTTGCTTCAGCACTATACTCGATGGATGTTCAGAATGCAATAATATGGAATTTGGGATACAAATTCATGGACTCACAATAAAGTTTGGTCATGTCT CTGACGTAAAATGTGGTACTGCTTTAATAGATTTGTATGCTAAATGCAGGAGTTTGCGGTCCGCAAGAATGGTTTTTGACAAGCTCCAAAATAAAACTAT TGCTTCATTTAATGCAATTCTAGTTGGATACTTAAATTCAAAGTTGAGAGATGATGATGAAGAAGATCCTATGACATTTTTTAGCAAACTGAGATTCAAT GGTATGAGACCAGATTGGGTGACATTTTCGCGACTCCTTAGTTTATCTGCTAATCAAGCATGCTTAGTTTCCGGGAAGAGTCTTCATGCTTACACAATAA AGGTAGGACTAGAAGATGATATTGATGTAGGCAATGCTGTAGTTACCATGTATGCAAAATGTGGTAGCGTTCCGGATGCTTATCAAATATTCAGTTGTAT GAAACATGATTGCGTGACTTGGAATGCTATAATTTCTGCATTCGCACTTCACGGCGAAGGCAACAAAGCACTTTCGCTCTTTGAGGATATGAAGAAAGAG GGATTTGCTCCTGATAAGATTACAATATTGGCTGTTCTCCAAGCATGTAGTTACTCAGGCTTATGGGAAAGTGGGATATGCTTATTCAATGAAATGGAAC CCAAGTATGGGATCAGACCGGTAATCGAGCACTTTTCTTGCATGATCGATCTTTTAGGTCGATCGGGAAATCTACCCAAAGCTATCGATATCATCAACAA GAACCCTTTTCCTAAATCGACTTTGCTTTGGAGGACTTTCGTCAATGCTTGTAAGCTGTGTGGTGATTTACAACTTGGAATGTGGGCTTCCGAAAAATTG CTTGACTTAGCACCCAGTGATGCCTCTTCCTACATACTTGTATCGAATATGTATGCTGAAGGAGGCATGCTAAAGGAGGCTGCAAAGGTAAGAACAGCTA TGAATGACTTGAAGTTAATCAAAGAAACTGGTTCCAGCTGGGTTGAGATAGACAATGAGGTTCACTATTTTATTGCCAGCGACAAAGATCACCCGGAAAG CAGAGAAATATACGCGAATCTGGATCTATTAAGAGAAGAAATATTTTTGGAGCTTCAAGAACAGAAATAATAACCAACTGATCTCAGGTTCTCTAACATA ATATTATTGGAGTTGCTTTAGTTCAATAGCAAGATTTCAACAATATTTCAAAGGGGTGGAGGGAGGATTTTGAAGTAGATGACTCATCCATAACAG BLAST
Tissuepods
Gene nameLI_gene_145491; 
Additional informationdetails; 

Expression of Ll_transcript_520863

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_520863
BlastpPentatricopeptide repeat-containing protein At4g39530 from Arabidopsis with 39.89% of identity
BlastxPentatricopeptide repeat-containing protein At3g02330, mitochondrial from Arabidopsis with 34.5% of identity
EggnogPentatricopeptide repeat-containing protein(ENOG410Z7Z7)
KeggLink to kegg annotations (AT4G39530)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019414589.1)
PfamPPR repeat (PF01535.19)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;