Ll_transcript_520867

• Id Trinity: TRINITY_DN46558_c1_g2_i2
• Name Transcript: Ll_transcript_520867
• Sequence: CAAAATTATTATTCACCTGTGACAAACATATAGTTTGAAGTCCTACAGCAGTAGAACTGTTTCATTTGAGTCCAACCCAAATACCCAATGACTCCAACAT TGTTCCAAACACTTTTTCCAATACCAATGCTTCCTTCTTATGCATTACCATTACCCATCCTTCCACCATTCAAAGCAAAATCAACCCATAATTGCTTTTT CCACCCCACTTTTCATAATGCCAAGAAAAGTCACAAACTTGAACCACCCCAATGTTCTAAACACTCTTTTGTTTCAACCCCTGACCACAACTTTCTTGAT GAATGGCCTCACCTTCTTCAATTCTCAATTGGGTCACAGGATTATATGCTTGCTCAGGCAATTCATGCCTCTCTCATTAAATTTGGTTCCGTAGGTGACC TGTTTGTGGATAACAATCTTGTCAACCTTTACTCGAAATTCGATAAAATGGTTGATGCACAGAGGATATTTGATGAAATGCTTGTTAGGAGTACTGTCAC TTGGACTACCCTTATGAAGGGGTATTCGAGGAATGGTGATTATGAGTCGGTTTTCAATATTGCGCGTGAGTTGTGCATTTGTGGGGAGAAGTTCAATGAG TATACTTGCACGGTGGTCCTGCAGGGATGTAAGTCCCCGCAAGACTGTGTTTTTGGCAAGCAGATTCATGCATTTGTTCTCAAAAATGGGTTTCATGAGA ATGTTGTTGTGGCCACTTCTTTGGTTTCTATGTACTCTAGAAGTGGCCACTTGGATCATGCAGAAAAAGTGTTCCGTGGTGTAAGTGTCGTAGATGCTCA GTGTATAAATTATATGATGTTGGAATATGGCAAGGCAGGCTTGGGGAATAAGGCATTTCAGATATTTGTGGATATGCTGAACTCTGGTTTGAACCCAAGT GATTATACGTTCACGAATTTGATAAGTGCGTGTGTTTCAAGCATAGGACTCGACCGAGGAAAGCAGCTACATGGGCTTGCCGTGAAGTATGGTTTTATGT GTGAAACATCTCTTGGAAATGCAACAATTACAATGTATGGGCAACATGGGATGATCGAAGAGGCTGAGAGACTGTTTCTTGAAATGGATGGGAAGACTTT GATTACTTGGTCTTCACTTCTATCAGCATTTGTTAAAACCGGCTATGCTAACAGAGCCCTTGAGTTTTTCTTAAATATGCTTGAGATTGGTATGCCTCCT GATTCTGGTTGCTTCAGCACTATACTCGATGGATGTTCAGAATGCAATAATATGGAATTTGGGATACAAATTCATGGACTCACAATAAAGTTTGGTCATG TCTCTGACGTAAAATGTGGTACTGCTTTAATAGATTTGTATGCTAAATGCAGGAGTTTGCGGTCCGCAAGAATGGTTTTTGACAAGCTCCAAAATAAAAC TATTGCTTCATTTAATGCAATTCTAGTTGGATACTTAAATTCAAAGTTGAGAGATGATGATGAAGAAGATCCTATGACATTTTTTAGCAAACTGAGATTC AATGGTATGAGACCAGATTGGGTGACATTTTCGCGACTCCTTAGTTTATCTGCTAATCAAGCATGCTTAGTTTCCGGGAAGAGTCTTCATGCTTACACAA TAAAGGTAGGACTAGAAGATGATATTGATGTAGGCAATGCTGTAGTTACCATGTATGCAAAATGTGGTAGCGTTCCGGATGCTTATCAAATATTCAGTTG TATGAAACATGATTGCGTGACTTGGAATGCTATAATTTCTGCATTCGCACTTCACGGCGAAGGCAACAAAGCACTTTCGCTCTTTGAGGATATGAAGAAA GAGGGATTTGCTCCTGATAAGATTACAATATTGGCTGTTCTCCAAGCATGTAGTTACTCAGGCTTATGGGAAAGTGGGATATGCTTATTCAATGAAATGG AACCCAAGTATGGGATCAGACCGGTAATCGAGCACTTTTCTTGCATGATCGATCTTTTAGGTCGATCGGGAAATCTACCCAAAGCTATCGATATCATCAA CAAGAACCCTTTTCCTAAATCGACTTTGCTTTGGAGGACTTTCGTCAATGCTTGTAAGCTGTGTGGTGATTTACAACTTGGAATGTGGGCTTCCGAAAAA TTGCTTGACTTAGCACCCAGTGATGCCTCTTCCTACATACTTGTATCGAATATGTATGCTGAAGGAGGCATGCTAAAGGAGGCTGCAAAGGTAAGAACAG CTATGAATGACTTGAAGTTAATCAAAGAAACTGGTTCCAGCTGGGTTGAGATAGACAATGAGGTTCACTATTTTATTGCCAGCGACAAAGATCACCCGGA AAGCAGAGAAATATACGCGAATCTGGATCTATTAAGAGAAGAAATATTTTTGGAGCTTCAAGAACAGAAATAATAACCAACTGATCTCAGGTTCTCTAAC ATAATATTATTGGAGTTGCTTTAGTTCAATAGCAAGATTTCAACAATATTTCAAAGGGGTGGAGGGAGGATTTTGAAGTAGATGACTCATCCATAACAG
• Tissue: pods
• Gene name: LI_gene_145491;
• Additional information: details;

Expression of Ll_transcript_520867

FPKM

• PAB: 0
• PNAB: 0.5
• PS1: 0.8
• PS2: 0.4
• PS3: 0.8
• PW1: 0.4
• PW2: 0.3
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_520867

• Blastp: Pentatricopeptide repeat-containing protein At3g02330, mitochondrial from Arabidopsis with 30.78% of identity
• Blastx: Pentatricopeptide repeat-containing protein At3g02330, mitochondrial from Arabidopsis with 30.78% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT3G02330)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019414589.1)
• Pfam: PPR repeat (PF01535.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;