Id Trinity | TRINITY_DN46563_c2_g1_i10 |
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Name Transcript | Ll_transcript_522293 |
Sequence | AGAACATCGATGCACTGAACCCTAACGAAAAATGCCTCCAAGGAAAAAATCCAACGCTTCTTCTTCCTCTTCCTCTTCCAAGAAACCTTCCAAATTCGGC ATTCAACACTTCTTCGATCGCCACACCGCTTCTCAGCAGAAGATTCAGCATTCCAATGATGCAAACCCCAACACTGCTTCCGATTCCAAATCAGCCACTC ATTTTACGGTTTTACCCTCGCCGAATCTTCCAGAACCTTCTGGATCGTCGAAACCAGGATGTGTTGCTCTCAGAACGGATGCGCTGGATGTTTCGCATAG CAGTGGTGGTAGTAGCAGTAACAATGATGTTAATCGGACGGCTGAGGTTACTCCGCCGGAGAATTTGGTGTTGCCGGGGATTGGTAATGTGGCGACTGAG AGTTTCGCGGCCGAGGAGTCTCCGGAGATGTCTAAGTCTGTGTCACTTAAACGCTTCAAATTCTCACCTGGGATGTTTATAAAGCAAAGTCAGGATGACG GGGCTGATGAGGTTACATGGAAGATATCTCCAGTGAATGAAAGACTCCAAGCAGTTTCGAAACAGATGCCTGCGATAATTAAAGCACTGTCTGACACTTC GAGAATCAACTTGCTGCCACTCCGTAGCTGCTCAGAAAATAAGGATTCTCTTGATAAAGATGGAAAGGTTGAAAAGTTGTTTACTTCACCTCCTCCCAAG GCTTCTTCAAAAGCTCTGGTGTCAATGAGTAAATTAGGGTTGAAAAGGATAAACCCAGATCGTGACGTGGATTCTAATATCAGTGCAGGTGCTGTGAGTA ACTCTGGAGCATCTAGAGGAGAGAGCCCCTTCAGAACTCCACCATCTTTGTCTTATTGCTCTGATAAGCTTGGCAAGGATATTGAGCACAGTGGACCACC TCATCACTCTTATTTGAGACACAAAAAGGAATTTCTTGAGCTGTTAGATCAAGTTGAAGATGCTATTGCTGTTGACGATGCTAATGTCTGTAATCAAAGC ATTTCCTGTTTTAAATCTCAAGGTGGAGTTTCTGATGAGCTTCCTGTCATAGGCAACCGTAAAGTAGAAAAGGCAAAATCACAAATACCTAAAGAGGCCG TTGGTGTGTTCTCCAATTATATTTTTTTGGTTTTAGAGGTGACTGAAAAATGTAGGATTTCTGATTCATCTGCTGCTGGATGCCAATACAAGGTGCTCCG TTTACTAAATGAACTAACTGGGGAAGAGCGGGCTGTAAACTTGTGGGATGAGTGGTCTTGCAGCGTAGTTGCGCCGGGAGACACTGTGAATGTAATCGGT CAATTTGAAGGGGGAAATTGCAATATTGATCATGATAATAATTTTTTGATTGTACACCCAGATATTCTGATGTCTGGAACACGGGTTGCTTCCAGTTTCA GTTGTGCAAGGAGAACTGTCTTAGATGAGAGGCTAAAATCAAACGAGTACTCAATTGCAGCTCTAACTGGAACCTTGCTTCACCAAATTTTCCAGGCTGG GCTTATAAAAGTGTCTCCCACGGTCAACTTCTTGGAAGAATATGCAGAAGTGGTATTACAAAGAAACGTTGAAAGTTTGTATGCATGCCAAGAAAATGAA GATAATGTTCGCAAAACCTTGATTAATTCTATCCCGAAATTATTAAGTTGGATCGGACAGTTCAAGAATACAGAGGAACGAAAAAACCCCAATGTTAATT TCAGATTTGATAATTGCCCAAAGAATGTTATCATATCTGAGGCAAGTTTACTTGGTCTCTTGTATTTAACTGACAGGTCTTACATATATTATTATGCATA CATAATAGATATGCATGTTTTACATAAAGTACAATTATATCTAAACAAGTTGTGTGGGGAAACCTCAGGCCCTAATGTTAAGTGCTTATTTGTCTATTGG AATGTATCTGCCTTTTCATTTTAGTTACTTTGAAGGATACCGTATCCCTGCTCTAAATTGTTTATTTCTTCAGTTCTATTTGCTATAATTTAATCTCTTG TAGAAAGTTTAGTGTAAGTGTGTTTATTTCACTTTGACCATGTAAATTGATGGTAGTTAGATGGTGATTAGCAAAGCCTAGTGGTTACTGAGTTAGTTAA ATGGGTGTTTGTTCAGTTGTGTTTGATAGTTAAATAGACAGAAGTGTACAGGATAGTAGGATTCAGATTTCAGCGACACTCAGTTAGTAAGAACAGTGCT ATTATTGCTCAGTTGTGAGAGAGTCTTTCTCCTTT BLAST |
Tissue | pods |
Gene name | LI_gene_145520; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_522293
Blastp | DNA replication ATP-dependent helicase/nuclease DNA2 from Bos with 35.17% of identity |
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Blastx | DNA replication ATP-dependent helicase/nuclease DNA2 from Bos with 33.33% of identity |
Eggnog | Helicase(COG1112) |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019452537.1) |
Pfam | DNA replication factor Dna2 (PF08696.10) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |