Ll_transcript_522297

• Id Trinity: TRINITY_DN46563_c2_g1_i12
• Name Transcript: Ll_transcript_522297
• Sequence: AGAACATCGATGCACTGAACCCTAACGAAAAATGCCTCCAAGGAAAAAATCCAACGCTTCTTCTTCCTCTTCCTCTTCCAAGAAACCTTCCAAATTCGGC ATTCAACACTTCTTCGATCGCCACACCGCTTCTCAGCAGAAGATTCAGCATTCCAATGATGCAAACCCCAACACTGCTTCCGATTCCAAATCAGCCACTC ATTTTACGGTTTTACCCTCGCCGAATCTTCCAGAACCTTCTGGATCGTCGAAACCAGGATGTGTTGCTCTCAGAACGGATGCGCTGGATGTTTCGCATAG CAGTGGTGGTAGTAGCAGTAACAATGATGTTAATCGGACGGCTGAGGTTACTCCGCCGGAGAATTTGGTGTTGCCGGGGATTGGTAATGTGGCGACTGAG AGTTTCGCGGCCGAGGAGTCTCCGGAGATGTCTAAGTCTGTGTCACTTAAACGCTTCAAATTCTCACCTGGGATGTTTATAAAGCAAAGTCAGGATGACG GGGCTGATGAGGTTACATGGAAGATATCTCCAGTGAATGAAAGACTCCAAGCAGTTTCGAAACAGATGCCTGCGATAATTAAAGCACTGTCTGACACTTC GAGAATCAACTTGCTGCCACTCCGTAGCTGCTCAGAAAATAAGGATTCTCTTGATAAAGATGGAAAGGTTGAAAAGTTGTTTACTTCACCTCCTCCCAAG GCTTCTTCAAAAGCTCTGGTGTCAATGAGTAAATTAGGGTTGAAAAGGATAAACCCAGATCGTGACGTGGATTCTAATATCAGTGCAGGTGCTGTGAGTA ACTCTGGAGCATCTAGAGGAGAGAGCCCCTTCAGAACTCCACCATCTTTGTCTTATTGCTCTGATAAGCTTGGCAAGGATATTGAGCACAGTGGACCACC TCATCACTCTTATTTGAGACACAAAAAGGAATTTCTTGAGCTGTTAGATCAAGTTGAAGATGCTATTGCTGTTGACGATGCTAATGTCTGTAATCAAAGC ATTTCCTGTTTTAAATCTCAAGGTGGAGTTTCTGATGAGCTTCCTGTCATAGGCAACCGTAAAGTAGAAAAGGCAAAATCACAAATACCTAAAGAGGCCG TTGGTGTGTTCTCCAATTATATTTTTTTGGTTTTAGAGGTGACTGAAAAATGTAGGATTTCTGATTCATCTGCTGCTGGATGCCAATACAAGGTGCTCCG TTTACTAAATGAACTAACTGGGGAAGAGCGGGCTGTAAACTTGTGGGATGAGTGGTCTTGCAGCGTAGTTGCGCCGGGAGACACTGTGAATGTAATCGGT CAATTTGAAGGGGGAAATTGCAATATTGATCATGATAATAATTTTTTGATTGTACACCCAGATATTCTGATGTCTGGAACACGGGTTGCTTCCAGTTTCA GTTGTGCAAGGAGAACTGTCTTAGATGAGAGGCTAAAATCAAACGAGTACTCAATTGCAGCTCTAACTGGAACCTTGCTTCACCAAATTTTCCAGGCTGG GCTTATAAAAGTGTCTCCCACGGTCAACTTCTTGGAAGAATATGCAGAAGTGGTATTACAAAGAAACGTTGAAAGTTTGTATGCATGCCAAGAAAATGAA GATAATGTTCGCAAAACCTTGATTAATTCTATCCCGAAATTATTAAGTTGGATCGGACAGTTCAAGAATACAGAGGAACGAAAAAACCCCAATGTTAATT TCAGATTTGATAATTGCCCAAAGAATGTTATCATATCTGAGGTAATTGATATTGAAGAGATGGCATGGGCTCCTAAATATGGTTTGAAGGGGATGATTGA TTCTTCTCTTAGAGTGAAAGTTCAATCAGCAAAAGATGAAGGAGAGAAGATCATGCCATTAGAGTTCAAAACTGGAAAGTCATCAAATAGCCAGTCATTA GTAGAACACCGTGCTCAAGTAATATTGTACACTCTCCTGATGTCTGAAAGGTACCAGAAGACTATTGATTCTGGTCTTCTGTACTATCTGCAATCAGATC AGACACAGGGTATTGTTGCTGAAAGATCTGACTTAGTGGGATTAATAATGCGACGTAATGAGCTAGCCAGTGATATTCTTAAGGCATTGACCTTGCAACA ACTGCCACCAATGTTACAGAGTCCTAGCCTTTGCAGAAGTTGTCGCCATCTTGATGTTTGTAGCATTTATCATAAGGCACATGGTGGAAGCACAGAGGGC AGTGGGCTGGGAAATGTGTTTGATTCTCATACTAATCACCTGACATCTGCTCATTCTAAGTTCCTCTGCCATTGGGATCGACTGATTGACTTAGAAGCTA AAGGGACTGAGCTTTTAAAGAAACAAGTATGGCGATCACATGGCTTGAAGAATCCAATCAATGGTGGCCTTTCCTCTATTGTTCTTGATTCTTCACATGG AATTCCTCTAGATAAATCTCCAAAAGACAATTATTTCATCTATTGTTTTGTACGACAAGATACTTCACGTCTCTCTGAAGTATCAGATGGTGATCCTTCT AGTGCTTCTCCAAATGATTTAGATCTCACACTTCGAAGTGGAGACCACGTGATACTGAGCAATGGATCTAGCTCTCAAACTATTGCAAGGGGGGTGATCT CAGATATTAGTCCGTCGCATGTATCTGTTTCCTTTTCTAAATGCTTAAGAATTCCTGGGAGGTCTTCCACTACACATGATCTCCTTGAACAGGTTTGGAG ACTTGATAAGGATGAATATGTCACATCATTTGCAATTATGAGGTTTAATCTTGTACAAATGTTTTTGCAAAATGATCAAAGTGGTCATCTGCGGAGAATG ATTGTTGACCTAGAGGCTCCTAGGTTTGACAGTGGATCTATAGTAAGCCAGGATCCAGCGATATCCTATGTTTGGTCAGAGAAGAGTTTGAATGATGATC AACGTAGAGCAGTTCTTAAGATGCTTACAGCAAAAGATTATGCACTTATATTAGGGATGCCTGGAACGGGGAAGACATCCACAATGGTTCATGCTGTGAA ATCCTTGTTGATTAGGGGCACATCCATTTTGCTGACGGCCTATACAAACTCTGCTGTTGATAATTTACTCATCAAATTAAAAGCACAGGGAATTGATTTT GTACGTATTGGAAGAGATGAAGCAGTGCATGAGGACGTCAGAGAACACTGCCTTTCAGCAACTCATGTAAAAAGTGTTGAAGATATCAAAATAAGGTTAG AACAGGTCAAAGTTGTTGCAGTTACTTGTCTGGGCATTTCCAGTCCTTTACTTGCTAACACAAGGTTTGATGTATGTATTATGGATGAAGCTGGGCAGAC CACTCTACCGGTATCCTTGGGCCCTCTAACTTTTGCTTCGGTGTTTGTACTTGTTGGGGATCATTATCAACTACCTCCACTTGTCCAGAGTACAGAGGCA CGAGAGAATGGCATGGGGGTAAGTTTGTTTCGTAGACTCTCAGAGGCACATCCACAAGCAATTTCAGCATTACAGAGTCAGTACCGGATGTGTCAGAGCA TTATGGACCTGTCAAATGCCTTGATATATGGTGACAGGTTGAGGTGTGGTTCGTCCGAGATAGCTAACAGAAAACTTGAATTTTCTGACTTAAAATGTGG TTTTCCTTGGCTAGAAGATGTTTTAAGCCCAAGCAGGCCAGTGGTATTTATTGATACTGACATGTTGCCTGCTTTAGAGACAAGAGATCAGAAGATTATA AAAAACCCTCTTGAAGCTCACATAATTGCCGAGGTTTCAAAGGAATTGGTCAACAATGGGATTGCAGTAGAACAAATTGGTGTTATTACCCCCTATAATG CTCAGGCAAACCTCATTCGGCATGCTGCTTGCATGACTTCCTTGGAGATACATACCATTGACAAATACCAGGGTAGAGATAAGGATTGCATTTTAGTATC TTTTGTAAGGTCTAGTGAAGGCCCAACAAGCAGTGCTGCTTCTTTGCTTGGAGACTGGCACAGGATAAATGTGGCTCTCACTCGTGCAAAGAGAAAGTTG ATCATGGTGGGGTCTCCTAGAACTCTATCAAAGGTTCCACTATTGAAGCTTCTCATTAAGAAGGTTGAGAGGCAGTCTGGAATTCTAAGTGTCTCTAAGA AGGACATCTTTCAAACAGGTGAGCTTAAGAGATGTTCCCAATTGAGATGAGTGAATATTCTTTTCCCTTTATTAAGAAAGGTTGTGCAATTTTGTTACTA TCACCCATCAAATGCCATGTTTTAATGGTGATTTTGATTTAGAAATGTAAATATAGAATATTTAATAAGATAACCATTCTTTTA
• Tissue: pods
• Gene name: LI_gene_145520;
• Additional information: details;

Expression of Ll_transcript_522297

FPKM

• PAB: 0.2
• PNAB: 3
• PS1: 2.7
• PS2: 1.2
• PS3: 1.7
• PW1: 1.4
• PW2: 0.6
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_522297

• Blastp: DNA replication ATP-dependent helicase/nuclease DNA2 from Xenopus with 35.11% of identity
• Blastx: DNA replication ATP-dependent helicase/nuclease DNA2 from Xenopus with 35.52% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (378492)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019452537.1)
• Pfam: DNA replication factor Dna2 (PF08696.10)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;