Ll_transcript_520975

• Id Trinity: TRINITY_DN46569_c1_g1_i9
• Name Transcript: Ll_transcript_520975
• Sequence: CAACCTCATTCTCAGTTTCTCCTATGTTCTTCTTTCATGGTTGATGATGTTCACCAAGTGGGTCCCACGTTTCATATCAAGTAAAAAATGGAACTTGAAC AATGTGCAATGTTTTTCATCACCCACAAGAGTGAAATCTCCTCTAGAAATGGCTTCAAAGCATGGTGAACTAAGAGTCTTCATTGTTGCTGGAGAAGTTT CTGGAGATTCCATTGCTTCTCGTCTTATGGCTTCTTTGAAACTTCTCTCACCTTTACCTCTTCGTTTTTCTGGTGTTGGAGGGTATGTTTCTAACCAATT ATGAACTCTAATCATATACTTCAATTATCTCTCAAAGTTATATTATTTTGAATTATGGGTAGTATATTATAGATGCAATCAGTTATTTTTTTATTTATCA ACAAATCGTTGGTCTAGTAGTGTAAGTCTATAAGGGTGTAATGCCGACTAGATACTCAGAAAAGCCAAAAGGTTAATGTTTTGATTCCCGGGAGCGACAC TTGTTGGGGAATGAGGATCAGCTTTCCCACATTCTTGTATCCTATTGTGTCTCAATCCAATGAAAAGTTGCTACCTATTTGAAAAAAATAGAAGAAACAC AATAACATTTTTATGTTATTTGGTGAGATATGATTGGCTCGGGACATGGAGACAGAAAATTTTGGAACAGAGGATCTTGGTTCCTTGTTGGGAGGAACAA AGGGATTTGCTCGTTACCCGAAGGTGAGTTATACCCTTGGTAGTACAAAAAAAGTTATTTTTGTGTGTGAATATGTTTAGCGAAAAGTTATTGTAAAATG ATGTTCTGAGAAATTGATTGTTGAGGTTATCGATTTGGTTAGTAATTTTTACCTTATTAGTATCATCTGAATTTCTTGGTGAGTTCAGTATGTGGTACTA TGGTTGAATGAGAGAATCTTGTATCTATCGTTCCATCATCGACCGGTCATGTGTTCGTGATCATTGACTCTGAAGTAAAAACAATATATATGAATGGTGG ATGATAACTCGACATTATAAAAAACTTTAGACTGATGATACATAACAATTAAACTCTTTTTAATAAGCTTAAAACTTTTAGCTTCAATAATTGAGGGAAG AGAAATACTCGGAAGCCATGAAAAACACTTATGAGATGGCTCTGAGGTTTTGCATTGCCCTCCCCCCTACCAAAACAAACTCACAAACAGACCTTTAGGC TCCTTAGCGGTAGATTTTTTTCTTGGCTATGTATCAGTCCACATGATTATGAAACTTGCGGTGTTGAATGTATTGAATGTTGGATGGCTACATTGAAAAA ATGAGCTTCAATTCAATATAGCGTAAATGAGAATGTTGCATTGGTTGAGTGGACATACTAGACAAAATAAAATTAAGAATGGTTGCATTAAACCGTAATT TGAGGTAGCATCTATTATAGAAAAATAGTATAATCTTACTTTAGGTGGTTTGAGTTTATATGGAGAAGACATGTAGGTGGTCCGGGGATGGTAAATGTTT GCAGCCTGACCCTCACAAGTGAAGAGTCTCTTTCCAGGATTTGAACTCATGAGTTCCAGGTCAAAAGGCAAACAACCTTACCAATGAGTCGGGACTAACC TTTGTATGTTTCAATTGATTGTTTGGTCTTTCAAATGCTTTTATCTATTTCAGGGCTAAAATGTCCAGTGAAGGATTGCAATCTTTGTTCCCTATTGAGG ACATCTCAGTAATGGGAATTTGGGAGCTATTACCGCATTTGTATAAATTCAGAGTAAGTAACTAGTACATTGTTTATCTTAACATCATGCTGTATAAGAA GAAACTTCAATTCCAAGAAGCCCGCGCGCCATGGATTGTTGAATCGTATACGCGATGTATGTGTTAGTAAAAGAGAGATAAACAGATTATAAATTTTTAT CGGTTTATAAAATTGTCAGGTAAAATTAAAGGAAACTGTAGAAGCAGCTGCTATATTTGAGCCTCATGTAGTAGTAACAGTTGATTCTAAAGGCTTCTCT TTCCGGTTCTTGAAGCAGCTAAGAGGTATTAACGCATCCACCTCGCTGGAAAAGTGCCACTTGATTATATATGCTCTATGCCGACGGGGAAATACATTTT GCAGCTATATACAGTCAGAAAAAGTTGTATTCAGCAGCACATTTTCACTATGTTGCACCCTCATTCTGGGCATGGAAAGGAGGCGAAGCAAGACTCAGAG GACTAGCATCGTTTGTGGACCATCTATTGTGCATACTTCCGAATGAGGACAAAATCTGTCGGTTGAATGGATTAGCTGCAACCTTTGTTGGGCATCCTGT CCTTGAAGATGTTCTAGAGTTGAATTTGAGAAACAATTCCTCGGTCCAAGAACGGAGGGCTGAAGGAAATGCTGAAGACTTCCGAACTAAACATGCAGTG CCCTCAGGAGCCACTGTTGTCAGCTTGCTTCCCGGAAGCCGAGTACAAGAGGTGACTCGAATGCTTCCCATCTTTGCAAACACGTTCGAACTCCTGAAAG ACACTTTTCCGAATTTGATGACTGTCATTCATGTTGCCCCTAATGAGCATGTGGAGAATTTCATTGCTGGTGCTGTTCATAGATGGCCTGTACCTGTTGT ACTAATTCCAGGAGGAACAACACAACTGAGATATGATGCTTTCAGTGCAAGTAAAGTTGCATTATGCACATCTGGAACAGTTGCTGTTGAGCTACAACTT GCACGTTTACCTTGTGTTGTTGCATATCGTGCCAACATTTTAACAGAATGGTTTATTCAGTACAAAGCTAAGATAAAATACATTTCACTTCCCAACATTC TCTTGGATTCAGACATCATTCCGGAGGCACTTTTTCGATCCTGCACGCCGGAGAATCTAGCCTTGTTGCTCAAGGATTTAATAACTGATAGCAGTTGTCG CGAAGAACAAATAACTGCAGCTGAAAAGTTTGTGAAGCTTCTATTGCCTTCAGAAGGAATAAAGCACAACCTTCTTCAACAAAATGTGATGACAACATAT CCTCAGTTCAATCCAAGTGTAGTTGCAGCACTGACTATATTAAATCATGGAAACTCACTGTGACTAATGTGTACCGAAATCGTATTCGGTGAAAGCCGCA ACAACCAAGCCTTATTCTTACTAGCCGAAATGACATTAAACAAATTCAGTGTAAAAGTTGAAGGTCTGAAGCTTGAGATACAAGTCAAGTTACTTAATAC TATCAGAAGTAATATTATTTTATCAGAAGGGTGGAGATCAAGTTACTGCAGAGTAAGTTTAAAAGAGTTACTCTCCATCTCAGCCATCAATTTTTTTGAA AATCCAGTGGTTTAAATCTATCCATTAATTCAAACCATTGAATTTCTGTAAAATTGATGGTTAGGATGACGAGTAAGTATAAAAAACTTACTCTTG
• Tissue: pods
• Gene name: LI_gene_145551;
• Additional information: details;

Expression of Ll_transcript_520975

FPKM

• PAB: 0.2
• PNAB: 0.1
• PS1: 0.1
• PS2: 0.6
• PS3: 0
• PW1: 0.2
• PW2: 0.1
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_520975

• Blastp: Probable lipid-A-disaccharide synthase, mitochondrial from Arabidopsis with 57.23% of identity
• Blastx: Probable lipid-A-disaccharide synthase, mitochondrial from Arabidopsis with 57.23% of identity
• Eggnog: Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell (By similarity)(COG0763)
• Kegg: Link to kegg annotations (AT2G04560)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019462594.1)
• Pfam: Lipid-A-disaccharide synthetase (PF02684.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;