Ll_transcript_520978

• Id Trinity: TRINITY_DN46569_c2_g1_i1
• Name Transcript: Ll_transcript_520978
• Sequence: CGCAAAATCAACTAGAAGTGCAACACTTGCAAATTTGCAATGCTAAGGGTTCAATTCAATTAAATTCAATCCCCAAACCTATTTATTCTCAATTCAACCC CATTCCCACGAACCCCAATCTCAATTGAATCGCAAAATGTCAACTTAGAATCACCAAAAGTGGTTTCAGATAATGAAAATCACTTCTTTTGTCACAATTC AGATTCATCAAAATCACCATGGGGAACAAAATTGCGCGAACCACACAAGTTTCAGCATCGGAGTACTACCTACACGAGCTTCCATCAACGTACAATCTGG TTTTGAAAGAGGTTCTGGGACGCGGTCGTTTCTTCAAGTCAATTCAGTGCAAGCACGACGAGGGTTTGGTACTCGTCAAGGTTTATTTCAAGCGCGGCGA TTTCATCGATCTATCTGAATATGAACGCCGTCTCTCTCTCATCAAACACATTTTCCAATCCATTGATCACCCTCACCTTTGGCCCTTTCAGTTTTGGCAA GAAACAGATAAAGCAGCGTATCTTTTGAGGCAGTATTTCTTCCACAATCTGCATGATCGATTGAGTACTCGACCTTTTCTCAGTTTTGTTGAGAAGAAAT GGTTGGCTTTTCAGTTGCTTTTAGCTGTTAAACAATGCCACGATAAGGGAGTATGTCATGGTGATATAAAGTGTGAAAATGTGCTGATAACATCCTCAAA TTGGCTGTACCTTGCGGACTTTGCATCTTTCAAACCTACATACATTCCATATGATGACCCATCAGATTTCTCTTTTTTCTTTGACACTGGTGGGAGAAGA CTCTGTTATCTAGCGCCTGAGAGATTTTATGAACATGGAGGGGAGATGCTGGTTGCGCAAGATTCCCCTTTAAAGCCATCTATGGATATATTTGCTGTTG GGTGTGTAATTGCAGAACTTTTCCATGAGGGGCAGCCATTATTTGAACTGTCTCAACTTCTTGCTTATCGCAGAGGGCAATATGATCCAAGCCAGCATCT TGAAAAAATACCAGATCTCGGAATACGTAAAATGATACAACATATGATTCAGTTAGAACCGGAGTCTCGATTTTCTGCCGAAACATACCTAAGGGAATAT GCTGAAGTTGTTTTTCCGACCTATTTTTCACCTTTCCTACATGATTTTTACCGATGCTGGAGTCCTCTCCATTCTGATATGAGGGTTTTATTGTGCCAAA GTGCTTTCCAGGAGATACTCAAACAAATGATGAAAGAGAAGTCAACTGATGATGTAAGTGTTACTTCCAGTGAACTTTTGGAAGAGATGGTTAATAAAGA AAGTGTGAGTTTCATGAAGGACTCCATGATGAAGAGAGAGGGCATAGGCAAAGGCTTAGTTCATGATCACTATGAACTTCTTGGTGATATTAGTAGTCTT CTGAGGGATGCTAAAAAAAGTAATGTTCCATCTGGTCCCCGACATGTAACAGGAAATTCACACAATTCTACATTTCCTGAAAATCTAAACTATTTGCAAT CTCCCGATGAGCTGCTTCAAACTATCTCCAATGCATTTCGAGGAAATGACCACCCATTTCTGAAAAATATTACTTTGAATGATCTGAATTCGTTCATGTC TGAATATGATAGTCAATCAGATACATTTGGAATGCCTTTTCTTCCATTACCGAAGGATAGTATGAGATGTGAAGGCATGGTTTTGATAACTTCTTTGCTC TGCTCTTGCATACGCAATGTCAAGTTGCCTCACCTGCGGAGGGCAGCTATACTCTTGTTGAAGGCTTCTGCCATATATATTGATGATGAAGATCGTTTGC AGCGTGTTATCCCATATGTGATTGCAATGCTTTTGGATCCAGCAGCAATTGTGCGATGTGCTGCTTTGGAGACTTTGTGTGATATTCTGCCCTTGGTGCG CGATTTTCCTCCGAGTGATGCAAAGATATTTCCTGAGTATATTTTCCCAATGCTTTCTATGCTTCCTGACGATCCAGAGGAAAGTGTGAGGATATGCTAT GCCAGCAATATTGCTAAGCTGTCACTAACTGCATATGGATTCTTGATACACTCGATAAGCTTGAGTGAGGCAGGTGTCCTTGATGAATTGAGTTCGCCAC AGAAGCCATTGATATCAGGCAGTCAGTCCTCTGGACGAATGAAGAGGATAAATAGTGATGTCCAACTTGTACAGCTGAGGAAATCCATTGCAGAGGTTGT CCAAGAACTTGTTATGGGTCCAAAGCAAACACCGAATATTAGGAGAGCACTTCTTCAAGGTATTGGTAAACTGTGCTTCTTCTTTGGTGTGAGACAGAGT AATGACTCTCTCTTACCCATCCTGCCTGCTTTCTTAAATGATCGGGATGAGCAGTTAAGAACAGTATTCTACGAAAAGATTGTTTATGTCTGCTTTTTTG TGGGCCAAAGAAGTGTAGAAGAATATCTATTACCTTATATTGAGCAGGCTTTAAGTGACACAACCGAAGCTGTCATTGTTAGAGCCTTTGAGTGTTTGGC TATTTTATGCAAAAGCAGGTTCTTCCGAAAAAGGATACTGCTTCAATTGATAGAGAGTGCCTTTCCTTTATTGTGTTATCCTAGTGAATGGGTACGGAGA TCAGCTGTCTCTTTCATTGCTGCTACCAGTGAGAGCTTGAATGGAGTAGATTCTTATGTTTTCCTTGCCCCTGTTATACGACCTTTCCTCCGTAGGCAAC CTGTATCTCTTGCTTCAGAGAGGGCTCTTTTGTCATGCTTAAAACCTCCTGTCTCGAGACAGGTTTATTATGAAGTCTTTGGGAACTCCAAGGGTTCAGA CATGTTAGAAAGACAGAGAAAGATATGGTATAGTTCTTCACAGTCTAAACTGTGGGAAATGGATTTATTGAAAAAAGGAATCGAGGAGTTGGACTCAAAG AACTGGACTGACAAGCAGCAAGATCCCAGGGTTCAACAAGCTGTTGGCAGTGCCTCTCAACAGTCAGGGCTAACTGATAGTGACAAAGCTGAGGCAAAAT TGAGAGGTATGGGGGCATTTATGCATAATGATAGCAGTATGGCAGGACATCGTGATCCCCAAGGCTCAGAAAAGCTACAGTTTTCAGGATTCATGTCACC ACATTTTTGTGGTGCAAACAGTTTGACATATGAAAAGCCATCAGAAGGCATACCTTTGTACTCCTTCAGTGCAGACAGGCGGGGAATGGGAGTCCCTCCG GCAGCATCTGATTATCCACTACAAATGAATTCCCTGAGTGTCAATTCATCTTCCATGCCTTGGGTTAATCCACTCAGCAAGTCCTTTAATTTGGCTAGCT CAGTTCCATCTCCGAAGCTTTTTTCAGGTTCTTTCAGCATCAACAATGGTTCTAAACAGTTCCATCGGGTGGTACATGAACCAGATGGCAAGGAAAAGGA GACAACCTATGTTAATAGCTCATTTCAAGATATGGGATTATCTGCTAACATTAAAGGTACTTCAATCACAATGGAAGATGCAACTTCCCAAACTGATCTA TCAGAATTTCCATCTTTTGCTCGAACATCCATTCCTGATTCGGGTTGGAGACCCCGTGGGGTGTTGGTTGCTCACCTCCAGGAGCACCGTTCAGCTGTCA ATGATATAGCAGTTTCTGCTGATCATAGCTTCTTTGTGAGTGCATCTGATGACTCTACACTTAAGATTTGGGACTCGAGAAAGCTGGAAAAGGACATTTC ATTCAGGTCAAGGCTAACTTATCATCTGGAGGGAAGCCGTGCATTATGTGCAGCAATGCTTCCAGGTCCTGCGCAGGTACTAGTTGGAGCATCTGATGGA TTGATTCATATGTTTTCTGTTGATCATATCTCTAGAGGGCTAGGAAATGTTGTTGAGAAGTATTCTGGTATTGCTAATATCACAAAAAAAGATGTCAAGG AAGGTGCCATACTCAGCCTTTTGAATTGCCCCACAGATAATTATACCATCATGTATAGCACCCGAAACTGTGGCATTCATCTGTGGGATACTAGGTCAAA TTCTGATTCCTGGACCCTAAAAGCTACTCCTGAGGAGGGCTATGCGTCTTCTCTTGTTTCAGGCCATTGTGGTAATTGGTTTGTTACAGGGTCTTCCAGG GGTGTTATTACACTTTGGGACATGAGGTTTCTTATACCTGTGAACTCATGGCAGTATTCTCTTGCTTGCCCTATAGAAAAGATGTGTCTCTTTCTTTTTC CTGCAAATGCTTCTCTGTCTTCAACTGCTAGGCCCCTTGTTTATGTAGCTGCTGGTTGTAATGAAGTTTCTCTTTGGAATGCAGAGAATGGTAGCTGTCA CCAGGTGCTAAGGGTGGCCAATTATGACAGTGATGCAGAAATGTCTGATTTGCCTTGGGCCTTGGCCAGGCCTTCAAGTAAGCCAACTTCTGCATCAGAT CTTAGACGGAATGTTAATCGCAAATATGGAGTGGATGAGATAAATGAACCTCCTTCCCGTATTCCTGGTATCCGTTCGTTACTTCCCTTGCCAGGGGGTG ATCTATTGACTGGGGGCACTGATTTAAAGATACGTCGATGGGATCATTCCAGTCCCGACAGAAGTTACTGTATTTGTGGCCCAAACTTAAAAGGAGTAGG AAATAATGATTTTTACGAATCAAAATCTAGCTTTGGAGTGCAAGTTGTACAGGAGACTAAAAGACGCCCTCTCACTGCCAAGCTGACAGGGAAGGCAATT CTTGCAGCAGCCGCCACTGATTCTGCCGGTTGCCATCGCGATTCTATTGTTTCTTTGGCTTCTGTTAAGTTAAACCAGAGACTCTTACTATCCAGTGGTA GAGATGGGGCCATCAAGGTTTGGAAGTAAATCACTAAATTTCATCTTGGCATTGTTGTACATAAGTAGAGTCTATTTGTAGTGGTTAAATCTGTACATAA AGTATAAGAACTAATCCATCAAATTACAAATAAGGCTAAAGCTCCCTCATTACCTTCCAATTATATGTTTGTTGAATACCCTTGAGGCCTTATCTGTACA CATGAAAAAGGAACTTAGATAAATTTAATACTAGTGACGGCCCTTTATACCATGCATGATTAAGTAACTTCCAACCTTTCAACCAATCATTCAAATTTGT AAAGTGCATTTGATATGAAAATCCTGAATAATTTATGAGGAAGGTTAATATAAAGTTTATTCTTT
• Tissue: pods
• Gene name: LI_gene_145552;
• Additional information: details;

Expression of Ll_transcript_520978

FPKM

• PAB: 4.5
• PNAB: 5.1
• PS1: 11.8
• PS2: 6.5
• PS3: 8.7
• PW1: 4.5
• PW2: 5.6
• PW3: 4.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_520978

• Blastp: Probable serine/threonine-protein kinase vps15 from Dictyostelium with 48.51% of identity
• Blastx: Probable serine/threonine-protein kinase vps15 from Dictyostelium with 48.51% of identity
• Eggnog: phosphoinositide-3-kinase, regulatory subunit 4(ENOG410XPDN)
• Kegg: Link to kegg annotations (DDB_G0282627)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019458006.1)
• Pfam: Protein tyrosine kinase (PF07714.16)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;