Id Trinity | TRINITY_DN46569_c2_g1_i5 |
---|---|
Name Transcript | Ll_transcript_520983 |
Sequence | TGGTATTGGTCAGATGTTAATCCTTCTAATGTGCCAATGTGCCATTACATGTGGGTTTTCTTGTCGGTCATTACTTGTCTAATAACATGATTAAGTTACT ACCCCACTCCAAGTTTCTCTCTTTCATTACTTTCTTTTGCCTGCCAGAGATTTTATGAACATGGAGGGGAGATGCTGGTTGCGCAAGATTCCCCTTTAAA GCCATCTATGGATATATTTGCTGTTGGGTGAGCATTCTTTGCTGCAAGAATTTTTGAGAAAATGTTTTGGTTTCTCAGTGTCTATTTCAGACTGCAATAT TTATGCGCATGAAATTTTATTAACTTAATTAACAATGGAGAAAAGAATTATGTATATTTGTTATTTGCAAGATTACGACCACCAAGGCATTTTACTGCTG TAAGTATGGTGAGTTATTGGTGTTGGTCATGTCTTAGTTTGCTATTAAGATGAATTTTATGTAACTCTGTATTGGACCTGAACTGTGCCTAGATCTGTTT TGTTGAAGCAGGTATGTGGTGCTCTAGATATGCCATGTTCTCACTTCTAAATTTCTAAGTTCTCGTTATTTTTGGTCTTATATCTCTTCTAAGCTGACAT ATTATTTTACTACCTCAGGTGTGTAATTGCAGAACTTTTCCATGAGGGGCAGCCATTATTTGAACTGTCTCAACTTCTTGCTTATCGCAGAGGGCAATAT GATCCAAGCCAGCATCTTGAAAAAATACCAGATCTCGGAATACGTAAAATGATACAACATATGATTCAGTTAGAACCGGAGTCTCGATTTTCTGCCGAAA CATACCTAAGGGAATATGCTGAAGTTGTTTTTCCGACCTATTTTTCACCTTTCCTACATGATTTTTACCGATGCTGGAGTCCTCTCCATTCTGATATGAG GGTTTTATTGTGCCAAAGTGCTTTCCAGGAGATACTCAAACAAATGATGAAAGAGAAGTCAACTGATGATGTAAGTGTTACTTCCAGTGAACTTTTGGAA GAGATGGTTAATAAAGAAAGTGTGAGTTTCATGAAGGACTCCATGATGAAGAGAGAGGGCATAGGCAAAGGCTTAGTTCATGATCACTATGAACTTCTTG GTGATATTAGTAGTCTTCTGAGGGATGCTAAAAAAAGTAATGTTCCATCTGGTCCCCGACATGTAACAGGAAATTCACACAATTCTACATTTCCTGAAAA TCTAAACTATTTGCAATCTCCCGATGAGCTGCTTCAAACTATCTCCAATGCATTTCGAGGAAATGACCACCCATTTCTGAAAAATATTACTTTGAATGAT CTGAATTCGTTCATGTCTGAATATGATAGTCAATCAGATACATTTGGAATGCCTTTTCTTCCATTACCGAAGGATAGTATGAGATGTGAAGGCATGGTTT TGATAACTTCTTTGCTCTGCTCTTGCATACGCAATGTCAAGTTGCCTCACCTGCGGAGGGCAGCTATACTCTTGTTGAAGGCTTCTGCCATATATATTGA TGATGAAGATCGTTTGCAGCGTGTTATCCCATATGTGATTGCAATGCTTTTGGATCCAGCAGCAATTGTGCGATGTGCTGCTTTGGAGACTTTGTGTGAT ATTCTGCCCTTGGTGCGCGATTTTCCTCCGAGTGATGCAAAGATATTTCCTGAGTATATTTTCCCAATGCTTTCTATGCTTCCTGACGATCCAGAGGAAA GTGTGAGGATATGCTATGCCAGCAATATTGCTAAGCTGTCACTAACTGCATATGGATTCTTGATACACTCGATAAGCTTGAGTGAGGCAGGTGTCCTTGA TGAATTGAGTTCGCCACAGAAGCCATTGATATCAGGCAGTCAGTCCTCTGGACGAATGAAGAGGATAAATAGTGATGTCCAACTTGTACAGCTGAGGAAA TCCATTGCAGAGGTTGTCCAAGAACTTGTTATGGGTCCAAAGCAAACACCGAATATTAGGAGAGCACTTCTTCAAGGTATTGGTAAACTGTGCTTCTTCT TTGGTGTGAGACAGAGTAATGACTCTCTCTTACCCATCCTGCCTGCTTTCTTAAATGATCGGGATGAGCAGTTAAGAACAGTATTCTACGAAAAGATTGT TTATGTCTGCTTTTTTGTGGGCCAAAGAAGTGTAGAAGAATATCTATTACCTTATATTGAGCAGGCTTTAAGTGACACAACCGAAGCTGTCATTGTTAGA GCCTTTGAGTGTTTGGCTATTTTATGCAAAAGCAGGTTCTTCCGAAAAAGGATACTGCTTCAATTGATAGAGAGTGCCTTTCCTTTATTGTGTTATCCTA GTGAATGGGTACGGAGATCAGCTGTCTCTTTCATTGCTGCTACCAGTGAGAGCTTGAATGGAGTAGATTCTTATGTTTTCCTTGCCCCTGTTATACGACC TTTCCTCCGTAGGCAACCTGTATCTCTTGCTTCAGAGAGGGCTCTTTTGTCATGCTTAAAACCTCCTGTCTCGAGACAGGTTTATTATGAAGTCTTTGGG AACTCCAAGGGTTCAGACATGTTAGAAAGACAGAGAAAGATATGGTATAGTTCTTCACAGTCTAAACTGTGGGAAATGGATTTATTGAAAAAAGGAATCG AGGAGTTGGACTCAAAGAACTGGACTGACAAGCAGCAAGATCCCAGGGTTCAACAAGCTGTTGGCAGTGCCTCTCAACAGTCAGGGCTAACTGATAGTGA CAAAGCTGAGGCAAAATTGAGAGGTATGGGGGCATTTATGCATAATGATAGCAGTATGGCAGGACATCGTGATCCCCAAGGCTCAGAAAAGCTACAGTTT TCAGGATTCATGTCACCACATTTTTGTGGTGCAAACAGTTTGACATATGAAAAGCCATCAGAAGGCATACCTTTGTACTCCTTCAGTGCAGACAGGCGGG GAATGGGAGTCCCTCCGGCAGCATCTGATTATCCACTACAAATGAATTCCCTGAGTGTCAATTCATCTTCCATGCCTTGGGTTAATCCACTCAGCAAGTC CTTTAATTTGGCTAGCTCAGTTCCATCTCCGAAGCTTTTTTCAGGTTCTTTCAGCATCAACAATGGTTCTAAACAGTTCCATCGGGTGGTACATGAACCA GATGGCAAGGAAAAGGAGACAACCTATGTTAATAGCTCATTTCAAGATATGGGATTATCTGCTAACATTAAAGGTACTTCAATCACAATGGAAGATGCAA CTTCCCAAACTGATCTATCAGAATTTCCATCTTTTGCTCGAACATCCATTCCTGATTCGGGTTGGAGACCCCGTGGGGTGTTGGTTGCTCACCTCCAGGA GCACCGTTCAGCTGTCAATGATATAGCAGTTTCTGCTGATCATAGCTTCTTTGTGAGTGCATCTGATGACTCTACACTTAAGATTTGGGACTCGAGAAAG CTGGAAAAGGACATTTCATTCAGGTCAAGGCTAACTTATCATCTGGAGGGAAGCCGTGCATTATGTGCAGCAATGCTTCCAGGTCCTGCGCAGGTACTAG TTGGAGCATCTGATGGATTGATTCATATGTTTTCTGTTGATCATATCTCTAGAGGGCTAGGAAATGTTGTTGAGAAGTATTCTGGTATTGCTAATATCAC AAAAAAAGATGTCAAGGAAGGTGCCATACTCAGCCTTTTGAATTGCCCCACAGATAATTATACCATCATGTATAGCACCCGAAACTGTGGCATTCATCTG TGGGATACTAGGTCAAATTCTGATTCCTGGACCCTAAAAGCTACTCCTGAGGAGGGCTATGCGTCTTCTCTTGTTTCAGGCCATTGTGGTAATTGGTTTG TTACAGGGTCTTCCAGGGGTGTTATTACACTTTGGGACATGAGGTTTCTTATACCTGTGAACTCATGGCAGTATTCTCTTGCTTGCCCTATAGAAAAGAT GTGTCTCTTTCTTTTTCCTGCAAATGCTTCTCTGTCTTCAACTGCTAGGCCCCTTGTTTATGTAGCTGCTGGTTGTAATGAAGTTTCTCTTTGGAATGCA GAGAATGGTAGCTGTCACCAGGTGCTAAGGGTGGCCAATTATGACAGTGATGCAGAAATGTCTGATTTGCCTTGGGCCTTGGCCAGGCCTTCAAGTAAGC CAACTTCTGCATCAGATCTTAGACGGAATGTTAATCGCAAATATGGAGTGGATGAGATAAATGAACCTCCTTCCCGTATTCCTGGTATCCGTTCGTTACT TCCCTTGCCAGGGGGTGATCTATTGACTGGGGGCACTGATTTAAAGATACGTCGATGGGATCATTCCAGTCCCGACAGAAGTTACTGTATTTGTGGCCCA AACTTAAAAGGAGTAGGAAATAATGATTTTTACGAATCAAAATCTAGCTTTGGAGTGCAAGTTGTACAGGAGACTAAAAGACGCCCTCTCACTGCCAAGC TGACAGGGAAGGCAATTCTTGCAGCAGCCGCCACTGATTCTGCCGGTTGCCATCGCGATTCTATTGTTTCTTTGGCTTCTGTTAAGTTAAACCAGAGACT CTTACTATCCAGTGGTAGAGATGGGGCCATCAAGGTTTGGAAGTAAATCACTAAATTTCATCTTGGCATTGTTGTACATAAGTAGAGTCTATTTGTAGTG GTTAAATCTGTACATAAAGTATAAGAACTAATCCATCAAATTACAAATAAGGCTAAAGCTCCCTCATTACCTTCCAATTATATGTTTGTTGAATACCCTT GAGGCCTTATCTGTACACATGAAAAAGGAACTTAGATAAATTTAATACTAGTGACGGCCCTTTATACCATGCATGATTAAGTAACTTCCAACCTTTCAAC CAATCATTCAAATTTGTAAAGTGCATTTGATATGAAAATCCTGAATAATTTATGAGGAAGGTTAATATAAAGTTTATTCTTT BLAST |
Tissue | pods |
Gene name | LI_gene_145552; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_520983
Blastp | Phosphoinositide 3-kinase regulatory subunit 4 from Mus with 32.88% of identity |
---|---|
Blastx | Phosphoinositide 3-kinase regulatory subunit 4 from Mus with 32.88% of identity |
Eggnog | phosphoinositide-3-kinase, regulatory subunit 4(ENOG410XPDN) |
Kegg | Link to kegg annotations (75669) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019458006.1) |
Pfam | HEAT repeat (PF02985.21) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |