Ll_transcript_521226

• Id Trinity: TRINITY_DN46578_c5_g2_i7
• Name Transcript: Ll_transcript_521226
• Sequence: CAAAATCCAATAATGTCAATTTATGTTGAGCTGTAGGATATGAAGTATGAACAGTGTAATGTGAATTCCAGAAACCATACCATACTATTCTCTCACTCCA ATTTCCCTCAAATCTATCAATTTCTCTTTCCTTCATCTCTCTTCAATTTTCTATTACCTTCAACCCAACCTTCTTCTTTTTCATCATCATCAATTTCTTC TTCTCAATAATACTAAAAAACAACTCTTTTTGTATTTCTTTCAATTGGGTTTCACTCTTTCAAATCAATAACAGACACTTCACTTAGTCACTATTTTTTC CATTCAACCTCATCTCAGATAACTGCTAAATTGTTGGTATCTTTGTGTTTCATAAATTGTTGATATTTGAATTAACTTGAATTTATCTATATTGTTAGTT ATTATTTGAGTCTAACAATTTTTGTATATATAATAAATGGTTTATTTGACTACGTAGTAAACATATAATGATGCTATTTTCTTCTCTAAAGTGATCATGT CCTTGTTTCGTTTACACCTTAAACGTTTAATTACTCCTTATTTCTTTGTTGTTTTCTTTGAACCTTGTGAGAAAAACAAAAAAATCACATTCCTCTATTA TTGCACGTGTTTTCATAACTTAATCTCAATTATGTTGTTTTACAAGGTTGGTGGTTTTTTCTTCTTCTTTTGTTCCTTAATTGAAATTACTGCTACTTTT TTGTCATGGTTATTATTAGAAGGAATATCCATTTGGTCTATTTTTGTTTTATTTCTTAAAAGGAATGAGATTTGCTTGTTCCATTCTTGCATTATTTTTC ATTGAATATGCAGTATTTTAAATTGTATAAGTTTTCTTTTATTTCATAGTGAGTAATTAAACTTAATGTGTACTTGTTTTAATCAGATAGGAATGGGAAT ATATCTCAGCACCCCCAAAACTGAAAAGTTTTCTGAAGATGGTGAAAATGACCATCTTAGATATGGCTTATCATCCATGCAAGGGTGGCGTTCAACAATG GAAGACGCTCATGCTGCACATACTGATCTGGATGAGTCCACTTCGTTTTTTGGTGTGTATGATGGTCATGGAGGTAAGGTGGTTGCAAAGTTTTGTGCTA AGTTTCTTCACCAACAGGTGCTCAAAAGTGAAGCATATGCAGCTGGAGATATAGGAACCTCTCTTCAGAAAGCTTTCTTAAGAATGGATGACATGATGCG CGGACAAAGGGGGTGGAGGGAATTAGCAACCTTGGGGGATAAGATAAACAAGTTTAGTGGGATGATTGAAGGGTTGATTTGGTCTCCACGAAGCAGTGAT GGTAATGAACAAGCTGACGATTGGGTTTTTGAGGAGGGGCCTCATTCTGATTTTGCCGGACCAACTTCTGGAAGCACTGCCTGTGTTGCAGTTATTAGAA ACAACCAACTTATTGTTGCAAATGCTGGTGACTCTCGTTGCGTGATATCTCGGAAGGGTCAGGCGTACAATTTGTCTAGAGACCACAAACCTGATCTTGA AATTGAGAAGGAAAGAATCTTAAAAGCTGGTGGTTTTATTCATGCAGGGCGGATTAATGGCAGTTTAAATCTTGCGAGAGCTATTGGTGACATGGAATTT AAACAGAATAAATATCTTCCTGCTGAAAAACAAATTGTAACTGCCAATCCAGATATAAACACTGTTGAGCTTTGTGATGAAGATGAATTTATGGTGCTAG CTTGTGATGGCATATGGGATTGCATGTCAAGCCAACAATTGGTTGATTTCATTCATGAGCAACTGCACTCAGAAACCAAAGCTTCTGCAGTGTGTGAAAG AGTAATTGATCGGTGCTTAGCGCCATCAACTGCCCGTGGCGACGGATGTGATAACATGACCATGATCTTGGTGCAGTTCAAGAAACATGCTCAATCAAGT GCACCATCAGAAGAGCAAACCTCTTCAAATGGACAAGTTGAATCTGAACCAAAACAAGAGAGAAGTGAAACTTAGTGTGTTCCAACCAAAACAGTTCAAA CATGTATTATATATAAATATATAGTATGTACCACTGCTTAGAATGCATCTGAATTGCCTATTTTTCTTTCATCTAACACTATATAACAGCAATTGTTCTG GTTATACATAAAAATATCACTCTTTCTTCCAAAAAAAAAAAAAAAA
• Tissue: pods
• Gene name: LI_gene_145611;
• Additional information: details;

Expression of Ll_transcript_521226

FPKM

• PAB: 20.4
• PNAB: 4.1
• PS1: 3.2
• PS2: 2.8
• PS3: 3.5
• PW1: 8.2
• PW2: 11.3
• PW3: 17.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_521226

• Blastp: Probable protein phosphatase 2C 60 from Arabidopsis with 79.32% of identity
• Blastx: Probable protein phosphatase 2C 60 from Arabidopsis with 79.32% of identity
• Eggnog: Phosphatase(COG0631)
• Kegg: Link to kegg annotations (AT4G31860)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019437805.1)
• Pfam: Protein phosphatase 2C (PF00481.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;