Ll_transcript_520507

• Id Trinity: TRINITY_DN46580_c6_g2_i5
• Name Transcript: Ll_transcript_520507
• Sequence: CCTACGTTTACCATCTTTGGTTGCCCTCCCGATCCTAAGTAAACTCTCGATTTTAACTACCTTGGGTATCAGACTGAGTGGTGTTTGGAAAGGGGGTGTG TTAGTCAGAGCTATTGGTAGGAGCAGTATCAGTGATGGGAGGATTTGGTTTGTTTTAGGTTACAGAATCATTAGAGGTGTGGGTTATGTGAGATTGTGAG TGGGGGTGAAGGTGCTGCTTCAGGGTTTTAAGATAAGGTAGATGACAAGGCAAATGGAAACCTATATTCATTGAATAGTATAGTACTCTTATTTCTTCTA GATGGTGAGAGGCATTTGGATCCATGTGGGAGGGGGAATACCCAGGAAATACACATTCTTCCGTCCTGAACTGCAGTTTATTTTTGTTATATGGTCCTAG GCCGGAATGTGTACTCTTGATTCTGATTATGTAATAAGGTGTAGCCTACAGCACCATATATAGTTTGACTGGGTAACCTATTGAAGAGTTACACAGCACT TAGGATTTCATGATCCCAAAATTTGAACCTCAAAGAAGCCTGGGCCAAGAGTTAGTCCTCCTCACATGTTAACAATGTGCCTATGCTTTCTTTGAACAAT CCCATTTTGGTGATGGGTGTGTTAGCATGACTCTAATTGATGCCACAGAGGCTAGGAGAGAGCTAAAGGGTCGGAACTCACTCCTCCAGTCTGTTTGCGC ATATTAGACAGTAGTTGTAAATTGGACTTCTGAATAGTTCTTGGAATTGTTTCAAGATAGTTCATGTTTCATACTTTTGTTTGAGGAGATACAACCATGT GTAACGAGTACATGAATCTATTATGACATATAATGTGTAACCATTTGATGATTTCAGGGGCAAGGAGCACAAGGTTTTTTTGTGTGTGTGTATATATATA TATTTATTTTAAGGTTTTAATACACAGTTGGTCCTTATAGTTTCCACTCAATTGGGCTGTGGTCTCTTTTTTGTTTATTGTTTTGGGTACTGTTCCCTAT ATTTTAACTACCGATAAGGACCAATTTTTTAAGGAGTGGAAACTGTAGGGGCCATTCCTTAGACAACATTGTTCATGTTGCATTTTCCAGAAGTACTAGG AGCCAAAGGTATAGTTCACTTTTGATTAGAATTTGTTCTTGTGGATCATGTGCATGAAGCTCTTGAAACTAATTTTCTGAAGCAATTAGTGATGGCTGTA TGCTAACTGATGTCGATAAACGACTAGATCGGGTTTTGGAAGCCATCATATTATGCCAAGCTTCTAAGAACAAACATACCTGTGGTAGGTTATAGTGGAA GTGGACTGCACCCCAGGTGAATTACCTGAAAGGCAGGGTTAGTCTCACTGCTATACTTGTGGAGATGCTTGATCAAATACAAAAGAACGCATCTAAGAAC AATGTTCATAATCCTTGCATTGTGCCAATTTATTTCATTTCTTTCTTTTTTATTCTTCCGATCCCACCCAGTGGGATCAAGGCTTGGTTGTTGGTTTTCT TTTTTATTCTTCAACTTCTGTTTTTATGTATAATTATATTTTTATGCTTCTGTTGCTTTTTGGATTGATTGTAGGATCGGGCAAATGAGATATATAAGAG GGTTGAAGATCAAAAATCTAGTAGGGGAAGAAATCAAGATGCTTTATTGGCTGCATGTCTCTACATTGCTTGTCGGCAAGAAGACAAGCCACGTACTGTA AAGGAAATTTGCTCTGTCGCCAATGGGGCCACGAAGAAGGAAATTGGCCGGGCAAAAGAATACATTGTGAAACAATTGGGTTTGGAGAAGGGTCAGTCTG TGGAGATGGGAACAATACATGCTGGGGACTTTATGAGGCGATTCTGTTCTAATCTTGGCATGAATAATCAAGCTGTTAAAGCTGCTCAGGAATCGGTGCA GAAATCAGAAGAATTTGATATAAGGAGGAGTCCCATATCAATTGCTGCAGCAGTTATATACATCATCACTCAACTTTCTGATGATAAAAAACCTCTCAAA GATATATCACTTGCCACAGGAGTTGCAGAAGGAACAATTAGGAACTCCTACAAAGATCTTTACCCCCATGTTTCAAAAATAATACCAAATTGGTATGCTA AGGAGGAAGATTTGAAGAATCTCTGCAGCCCTTAGAGCAAAATATTACCATCCATATTGAACCTATTATATGTCATTGGAGCATATTGTTTTTGATGCAC TAGACTGATTATAAAAACGGGGAAATTACACTAACCTCCCTCGAGGTTTCGGTTAATTACATTTACCTCCGCTCTTGTTTTAAAGAAATTACACTCATCT CTCCTAGAATGGCGGTGATTGTAATTACACTGCCCCCTTAAGCGAGATGAGTATAGCTTTATGAAACAAGAGGGATAGTAGATATAATTTCGTCAAACTT CAAGGGTAGACGGAATAATCGGAATAATTTCCCAGGTAAAAAATGAACAAGCCTTTATCTTCTGTTTATTTCTATCAATTCTCCTGCAGCCAAGCAACAT TTTTTTTCAGCCCATTTTTCCTTCTTTTCACCCTCCCAATCCAAGTACATTTTTGGGAGCGAGGCACCATATAATGTAAGAAATTGCTATACTCTGGTGC AGCATTCAAGAGTTAATGTCATAAAAACATGAACAAAACTTTCATCAATTGAATTCTTTTTTAATACCCATAATGCTTTTTTGGCTTGAATGGAATAGTA TTTGTAGGTGCAGCTTCTTTTGTACATTACATTTATATATTAGGAATATAACTAGTGCATTTTATTCTGCTTTAGATTCAATTACTTG
• Tissue: pods
• Gene name: LI_gene_145643;
• Additional information: details;

Expression of Ll_transcript_520507

FPKM

• PAB: 0.5
• PNAB: 0.7
• PS1: 0.4
• PS2: 0.4
• PS3: 0.3
• PW1: 0
• PW2: 0.4
• PW3: 0.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_520507

• Blastp: Transcription initiation factor IIB from Soja with 98.17% of identity
• Blastx: Transcription initiation factor IIB from Soja with 97.31% of identity
• Eggnog: Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre- initiation complex (DNA-TBP-TFIIB) (By similarity)(COG1405)
• Kegg: Link to kegg annotations (548070)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019453293.1)
• Pfam: Transcription factor TFIIB repeat (PF00382.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;