Ll_transcript_520509

Id TrinityTRINITY_DN46580_c6_g2_i7
Name TranscriptLl_transcript_520509
SequenceCACCAATCTTCCTATAAACACAAACGCTGCCAGATTTTATTAATCTGAACCCTATGTTAACGCGTTCGCGGGAGAAGAAAGAAAGAAACCTCGGGAAACA GTTACAAAACTCACCCCAATAATTCAGCAACACCCTCACTCCCAGAATCTAAACCCATCAATAGAAATTCCCAATTCTAAACACAGAAACAAAACCAAAA CAAGAAAACCAAAATATCAAAAACATGTCTGATGCATTTTGCAGCGATTGCAAGCGAGAGACGGAGGTAGTTTTCGACCACTCCGCTGGCGACACCGTTT GTTCGGAGTGCGGACTCGTCTTAGAGTCCCACTCCATCGACGAGACCTCTGAGTGGCGCACCTTCGCCAACGAGTCCGGCGACAATGATCCTAACCGTGT CGGTGGGCCCAGCAACCCTCTCTTGACGGATGGTGGTTTGTCAACCGTCATCGCTAAGCCGAATGGTGGCTCCGGTGAGTTCCTATCGTCGTCGCTTGGT CGCTGGCAGAACCGCGGCTCCAACCCCGATCGCGGACTCATCGTTGCATTCAAGACTATTGCTACTATGTCTGATAGGTTGGGACTTGTTGCAACCATCA AGGATCGGGCAAATGAGATATATAAGAGGGTCGAAGATCAAAAGTCTAGTAGGGGAAGGAATCAGGATGCTTTATTGGCTGCTTGTCTCTACATTGCTTG CCGACAAGAAGACAAGCCACGCACTGTAAAGGAAATTTGCTCTGTCGCCAATGGTGCCACAAAGAAGGAAATTGGCCGAGCAAAAGAATACATCGTGAAA CAACTGGGTTTGGAGAAGGGTCAGTCTGTGGAGATGGGAACAATACATGCTGGGGACTTCATGAGGCGGTTCTGTTCCAATCTTGGTATGAATAATCAAG CTGTTAAAGCTGCTCAGGAATCTGTGCAGAAATCAGAAGAATTCGATATAAGGTATATTTTGGTTTAGCTCATATTTTCCAAGAGGCTTAAATAGATGTT CGGTGCTCAAGGCTAGTTTGTAATATTGATTAAACTTTCAAACTAATGTAATTGCACATGGTTACAGTTGTTTATTTCCCGTAAATACAGTTTATTGTTG CTTCAAAGTGGAAAGTTGTTGGCAAAAGTTGTGTTAGTCATACAATGAAACAAGGATATTAGCTTCAACTGGGCTTTAGAAACTATGTAGAAAATGTTGG TCGAATATAGTATTAGACTTCCAAGTTCCCCTTTGAGAAAAAGGTGAAGGGTGAGATTATGGATTAGAACCCTGTAGAGTCTACACAATAGTGTGCTGGA TCTGGAGGAGAATTAGAAACTGAGCAGTGTTAGAAGTGGGAACTCCAAGGATTTTGTAGCATTTGTGAGTAATCACTTTGTCATTCTCCATCCTTTTCAA AGCTTTTTTCACATCCAAATTTCAAATTCTACGGTAAAAGGAGGAGTCCAATATCAATTGCTGCAGCAGTTATATACATCATCACTCAGCTTTCCGATGA TAAAAAACCTCTCAAAGATATATCACTTGCCACAGGAGTTGCAGAAGGAACAATTAGGAACTCCTACAAGGATCTTTATCCCCATGTTTCAAAAATAATA CCAAATTGGTATGCTAAAGAGGAGGATTTGAAGAACCTTTGCAGCCCTTGAATTGTAGACCAAAATATTACCAAAACTACTCTGAACCTGTTATGTCATT GGAGCATTTTGTTTTGGATGCATTAGACTGTTTGCAAAAAAAAAATTAACAAACCTTTTTTACTCAGTTTTTTCTCATCAATTCCTTGCAGTCAAGTACC ATTCGTTTTCTTTCTCACCCTCCCAGTCTAAGTACATTTTTTGGGAGCGAGTCACCATTTAATGTAAGAATTTGCTCTACCGTGGTGTGGGATCCGAGAG CTAATGTCATAAAAATGGCGAACTCGCCGGTTTCAATCGAGTTCTTCACTGTCGTTAATGATTTTTGAGGTGGATGGAGTAGTTGTAGCTTTGCACATTA CATTTATAAATATACCTAGTGCATTTGACTCTGTTGCAGATTCTGCAATTACTTGATTGTGTAAATTTGTCCTATTCCAGCTTAAAAGTTGGGGTGAGGA TAAATCAGAAGGGATTTCATCAGAGGCCTATTTCTAACCCATTTAGTCTTCATCTATTCTGCAAATAAAATTCACTTTGATTTTGTAAAAAGTTTGTAAA AAAGATGTATTAGCATAAAAGTTTTATTTAA BLAST
Tissuepods
Gene nameLI_gene_145643; 
Additional informationdetails; 

Expression of Ll_transcript_520509

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_520509

BlastpTranscription initiation factor IIB-2 from Arabidopsis with 94.65% of identity
BlastxTranscription initiation factor IIB-2 from Arabidopsis with 94.65% of identity
EggnogStabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre- initiation complex (DNA-TBP-TFIIB) (By similarity)(COG1405)
KeggLink to kegg annotations (AT3G10330)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019453293.1)
PfamTFIIB zinc-binding (PF08271.11)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;