| Id Trinity | TRINITY_DN46584_c0_g1_i16 |
|---|---|
| Name Transcript | Ll_transcript_520888 |
| Sequence | CAGAAGGCTATACATGTGTTGCAGAATCAGTGTTTCCGATAATGGTTGAAGACTTCTTTAGGTACTTTTTCTCAGATGATAGTGTAATGTTTCTCAAATC ATTTCATAAAAGATGTGGTAATAAAGACTTTACGTGTGCTTCGTGGCATCCTCAAGAGAATTTTGGACATGCTCGTGAACTGTCATTTCAACATCCAATT AAAGTGTACCTTGGAGCAACATTTGGTAGCTGTCATTCGGTCCAGAAATATCGAGTTTATAGGAACAGTCATTTGGTTATTGAGACCTTGCAAGAAGTCA GTGATGTACCTTACTCAGATTATTTTCGTGTTGAGGAACTGTGGGATATAGAGAGAGACCGGGATGAATCAAAAGAATGCTGCATTTTGCGGGTATATGT GAATGTCACATTTTTAAAGAGAACTATGTGGAAAGGTAAAATAGTACAGTCAACAATTGAAGAATGTCGAGAAGCTTATGCCACATGGGTGAATATGGCA CATGAGTTGTTAAAGCAGAAAAACCTTGAAGAACAAGAAAGCAATGCTATTGCTGTTGTAACTCAAAATGGCAAAATAAATTTTCATAGAGAAGGGAAGA CTGGAGAATCTTCAGAAGGGTCAATTGAGCAGAATAAGCCTACAACAATACAACCTACGTCCAACGTATCTGATGCTACCCACAATGTCAGCACTAGCTT GCAAGGGAATTTCATTGACACGGCATCTATTCCATCTTTGTTCAAAGAGTTTATGACAAAGCTCAGGCTGTCTTTGAAAAATCAAAGCAATCTTTCAGTG CTCCTTGTTACCATTTTCGCCCTGATTTTCTTCATGCAGTTTAGCATACTTATGCTGTTGGCCAGACCTCAACAGATACATGTGAGTAATGGTGTAGATT ACATGAATAAGATGGGAAGTGGAATGACCAGAAGTCCTTCAGACATAGCTTGGATGGAGAAAAGAATTCATCACCTTAAAGATGAGATGTACATGGTAGA GAGTAGGCTTGAGAGGATGCGGTATGAGCATGCACTCTTAAAAAAGCAACTAAAGGATCTAGACCTTAAATGATTACCAAATTCATCATTCTTCAATCCT ATTTCCTCTTCACATCTATGTGTGTATATAATATATGTGTAATGATGCATGGTAAGTGCCACATATTTAAATTCCTAAGTTCATTTGGAGTTCATGTATT TTTGAAGATAGAGAGAAAGAGGGATGTATGATGTAGGGGTTTGTTGGCACCATGTAAGCAATATACTTTATTTTCCTCAGTGCTTTTCAATTTTCAACAC ATTGTCTATTGGGTGGGTTTCATAGTGTGTTTGAAAACAAAAGTTAATGTAAAATGTAAATGTTTATTATTTTGGTACCGAAAGTGGGTGCAAGCCATGA ATTATTAAACTTAATTGAACCTAGAAAATGTAGTTAGATTCAATTTTTATTTAAGTGTGATTGTTTATATTTGGTTC BLAST |
| Tissue | pods |
| Gene name | LI_gene_145676; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_520888
| Blastp | Protein VASCULAR ASSOCIATED DEATH 1, chloroplastic from Arabidopsis with 47.8% of identity |
|---|---|
| Blastx | Protein VASCULAR ASSOCIATED DEATH 1, chloroplastic from Arabidopsis with 48.1% of identity |
| Eggnog | NA(ENOG41100KT) |
| Kegg | Link to kegg annotations (AT1G02120) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019450080.1) |
| Pfam | Domain of unknown function (DUF4782) (PF16016.4) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |