Ll_transcript_520876

• Id Trinity: TRINITY_DN46584_c0_g1_i6
• Name Transcript: Ll_transcript_520876
• Sequence: CTTTAGGTTCTTTTTTTTAGATTACGTTGTAAAGTTTCTCGAGTCATTTCATAAAAGATGTGGTGATAAAGACTTTGTGTGTTCTTCGTGGCATCCTCAA GAGAAATTTGGGTATGCTCGTGAACTGTCATTTCAACACCCAATCAAACTTTATCTTGGAGCAAAATTCGGTGGCTGCCGTGCGGTCCAGAAATATCGAG TTTATAGGACCAGTCATTTGGTTATTGAGACCGTGCAAGATGTCACTGATGTACTTTACTCAGATTATTTTCGCGTTGAGGGACTGTGGGATATAGAAAG AGACAAGGATGAATCAAAAGAATGCTGCATTTTGCGGGTATATGTGAATGTGGCATTTTTAAAGAAAACTATTTGGAGAGGCAAAATAGTACAGGGTACA ATTGAAGAATGTCGAGAAGCTTATGCTACATGGATAAGCATGGCACATGAGTTGTTAAAGCAGAAAAACCTTGAAGAACAAGAAAGCAATGCTATTGCTG TTGTAACTCAAAATGGCAAAATAAATTTTCATAGAGAAGGGAAGACTGGAGAATCTTCAGAAGGGTCAATTGAGCAGAATAAGCCTACAACAATACAACC TACGTCCAACGTATCTGATGCTACCCACAATGTCAGCACTAGCTTGCAAGGGAATTTCATTGACACGGCATCTATTCCATCTTTGTTCAAAGAGTTTATG ACAAAGCTCAGGCTGTCTTTGAAAAATCAAAGCAATCTTTCAGTGCTCCTTGTTACCATTTTCGCCCTGATTTTCTTCATGCAGCAGTTTAGCATACTTA TGCTGTTGGCCAGACCTCAACAGATACATGTGAGTAATGGTGTAGATTACATGAATAAGATGGGAAGTGGAATGACCAGAAGTCCTTCAGACATAGCTTG GATGGAGAAAAGAATTCATCACCTTAAAGATGAGATGTACATGGTAGAGAGTAGGCTTGAGAGGATGCGGTATGAGCATGCACTCTTAAAAAAGCAACTA AAGGATCTAGACCTTAAATGATTACCAAATTCATCATTCTTCAATCCTATTTCCTCTTCACATCTATGTGTGTATATAATATATGTGTAATGATGCATGG TAAGTGCCACATATTTAAATTCCTAAGTTCATTTGGAGTTCATGTATTTTTGAAGATAGAGAGAAAGAGGGATGTATGATGTAGGGGTTTGTTGGCACCA TGTAAGCAATATACTTTATTTTCCTCAGTGCTTTTCAATTTTCAACACATTGTCTATTGGGTGGGTTTCATAGTGTGTTTGAAAACAAAAGTTAATGTAA AATGTAAATGTTTATTATTTTGGTACCGAAAGTGGGTGCAAGCCATGAATTATTAAACTTAATTGAACCTAGAAAATGTAGTTAGATTCAATTTTTATTT AAGTGTGATTGTTTATATTTGGTTC
• Tissue: pods
• Gene name: LI_gene_145676;
• Additional information: details;

Expression of Ll_transcript_520876

FPKM

• PAB: 2.6
• PNAB: 11.9
• PS1: 8
• PS2: 8
• PS3: 7.8
• PW1: 12.7
• PW2: 11.9
• PW3: 10

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_520876

• Blastp: Protein VASCULAR ASSOCIATED DEATH 1, chloroplastic from Arabidopsis with 47.04% of identity
• Blastx: Protein VASCULAR ASSOCIATED DEATH 1, chloroplastic from Arabidopsis with 47.26% of identity
• Eggnog: NA(ENOG41100KT)
• Kegg: Link to kegg annotations (AT1G02120)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019450073.1)
• Pfam: Domain of unknown function (DUF4782) (PF16016.4)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;