| Id Trinity | TRINITY_DN46584_c0_g1_i9 |
|---|---|
| Name Transcript | Ll_transcript_520880 |
| Sequence | CAGAAGGCTATACATGTGTTGCAGAATCAGTGTTTCCGATAATGGTTGAAGACTTCTTTAGGTACTTTTTCTCAGATGATAGTGTAATGTTTCTCAAATC ATTTCATAAAAGATGTGGTAATAAAGACTTTACGTGTGCTTCGTGGCATCCTCAAGAGAATTTTGGACATGCTCGTGAACTGTCATTTCAACATCCAATT AAAGTGTACCTTGGAGCAACATTTGGTAGCTGTCATTCGGTCCAGAAATATCGAGTTTATAGGAACAGGTTATTGCTATACCTTTATTTACCAATCTATT TATGTATACTTTCATTCATCTTTTGCTCTTATTCAATGCAATTTTTTGGCTAGAGAGTGAGTCTCAGTGAGGTCACGGGTTCAAATTCTGGAAATAGTCT CTCTGCTTGAGGTAATGTTGTTTTATGTCTACCATCCCCAGAACCCATTAGGTGGGAACCTCGTGCATTGGGCTGCCTTTTTTACAGGTTTCGAGGACTT TCCAATAGAAAGGAAGCTAAATGTAGGATAAATATGGGATGGGTATCCCTAGTAGGTAGGGTGGGTTGGAGAACATAATGAAGTAAGCAGGAGTTCCCTT CATTTTTTATTATCTTCATAGCTGTGAAATGGGAGAAACCTAAAAATTATGATGCATGGTGCGGGAGTAGGTCAGAAGAAAATGTCTCTTGGCTGGTAAG TGTAGCCTAATGCAAAAATAGGTGTTAGTGTCAGAGTTCATGAAATCGATAAAAAATTAAACTTGGGATGCTTGATTTCCTAAAACTCTAAATAATAGGG AGGTGGAAGTTAGAAGGAATGTTTTTATTAATTTAGATAGTTTATTAGTCTCAAATTATGTGTTTTGTTGTCAACTTGAAATGGTTTATATCTTAAACTT ATTAAAGAGATTTTTGACGTTTGCTTTTATTTTCTCTTTTATGCTCCAGCACTAGTGGTTAGGAGATTTATCATGTTTAGTTGAAGAGTGATTTTTTTAT TGCTTTTGCTTCTTTTCTGCATGTTATTCTTTCTTTTATCTATTTTCTTGTGCTCTTTTATTGTTTGATATTTATTATTAAGTTACCGCAATGACTACAA GTAATACATGGAATTCCTGAGTTGTATGTGTTAATGTGACATGTATCTGTTACTTCTTCCAGTCATTTGGTTATTGAGACCTTGCAAGAAGTCAGTGATG TACCTTACTCAGATTATTTTCGTGTTGAGGAACTGTGGGATATAGAGAGAGACCGGGATGAATCAAAAGAATGCTGCATTTTGCGGGTATATGTGAATGT CACATTTTTAAAGAGAACTATGTGGAAAGGTAAAATAGTACAGTCAACAATTGAAGAATGTCGAGAAGCTTATGCCACATGGGTGAATATGGCACATGAG TTGTTAAAGCAGAAAAAAATTGAAGATCAACAAGAAAGTGTTGCTCGTGTAAATCAAAATGGCAGAATGAATTTAGATAGAGAGGAGACTGTAGAATCTT TAGAAGGGTCAATGGAGCCGAATAACCCTACAACTAAAATGATACAACCTACATCCAAAGTCGTTGATGCTACCCACAATGTTGACAATCACTTGCAAGG GAATTTCACTGGCACAATATCTGTTTCATCTTTGTTACAGGGGTTTATGATGAAGTTCAGGTTGTTTTTGAAAAATCAAAGCAATCTTTCAGTGATCCTT GTTACCGTTTTTGCTCTGATTTTCTTCATGCAGAAACCCTTCAGACATAGCTTGGATGGAGCAAAGAATTCATCATCTCAAAGATGAGATGTATATGGTT GAGACTAGGCTTGAAAGGATGATGTATGAGCATGCACTCTTGAAAAAACAACTTCAAGATCTAGAGGGTAAGTAGTTTTTTTCTTTTACCAAATTTGGTT GTTGTATAGTATTTCTCTATGCATAGTTTCTGTACATATAATAATATGTGTAAATTCACTCCTCATCGTCGAAAATGACAATCGTATTTACTTCTACTTC TAGGATCTGTTTGCGAGTTGAAAAATGTTAACATCCTTGTTTTGATTACTTTTACACGTTGTTCTGAATTGTGTGGATTTCATGTGGACCAGCTAAATAT GAGTTTTCTCTATTTAGTTAGTGGGTATGCCATGAAATGAAATTCATCTATAATTATTACTTAAAAGTGTTGTCCACATTTGATGTTGGTAAATCCTTAT TTTGGTTGGTGC BLAST |
| Tissue | pods |
| Gene name | LI_gene_145676; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_520880
| Blastp | Protein VASCULAR ASSOCIATED DEATH 1, chloroplastic from Arabidopsis with 36.43% of identity |
|---|---|
| Blastx | Protein VASCULAR ASSOCIATED DEATH 1, chloroplastic from Arabidopsis with 44.44% of identity |
| Eggnog | NA(ENOG41100KT) |
| Kegg | Link to kegg annotations (AT1G02120) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019464135.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |