| Id Trinity | TRINITY_DN46587_c7_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_521488 |
| Sequence | TTTTACTCTCATTCTTTCTACAATCAGTTTCAAATTTCACAACCCTTATCGTCAACCATGTCTTCTAATCCCGCCGCAACAAGGTCCACAACGACGCCGT CTCAGGAAAAACGACACCGTTCAATATTCGAACTTCCACATAACTTCTTCGATTCTTCTCTTCTCCTTCATTCTCCTCACTCTCTTCTCTCCGATCATCA TTTCCTTGATTCCCATAACGTAACCCTCCAAACCCTTGAACCATCCCAAAACGACGTCGTTTCTGCGCATAGGTGGACCTGTAATACCTGCAAAGCTCAA TTCGATTCGCTTCAAGACCAGCGTTCGCATTTCAAATCTGATATTCATCGATTCAATGTGAAACTGACAATTGCTGGAAAGAAAATTGTGAAGGAGGAAG ATTTTGAGGTGTTGACATCTGAATTAGTCCAAGACCATGATGTATCAAGTATATCTGGGTCCGATAGTGATGAAGATAGCGAAAATGAGTCTCAGAATCA AAATCAAGTGCGTTACAAATCAGGCGAAAGCCTCAAGCAAAAGTTATTTGTATGTCTGCAGACAGGGCAGAGAGTTTCTGTGTGGAAGTGTTTGATTATG AATATGAATGAGAATGTGTTGTATGATAATGAAAAAGAAGAGAGTAAAGTAGTTGAGAGGTTGAAATCTTTGACTCTTGAGCCGAGGGATAATACCCATT TGAGAATTGTTCTGCTTGCATCTGGTGGGCACTTTGCTGCTTGTGTATTTGATGGCGATGCGGTTGTGGCTCACAAGACATTTCACAGATATGTTGTAAG GGCCAAGGCAGGGAAAAAACAGTCGTCAAACGATGCTTCTGGCAGGGCTGCACATTCTGCTGGTGCTTCGCTTCGTCGTCATAATGAACTTGCATTAAAG AAGGAAATTCAAGAACTGTTTACTGCTTGGAAACATTATTTCGATGCTTCCAATTGCATTTTTGTACATGCACCTTCAAGCAGTCGTCTACTACTTTATG ATGGAGAAAGACCACACTTTACTAATCCGCAGTCTGCCATTAGAAATATTCCTTTGACTGTTCGGAGGCCTACTTTCAGAGAAGCGAAGCGTGTATATAG TCAGTTGACCCAAGTATCCTATGAAGTAGATGAGAAAGAAACCTTACAAAGCAACCAAGAGGACCTAGTATCAATTCCCATTGCTATAAGAAATGGCAGC CCATCTTCGAGCAAAGGAAACATGGAGGAGTTGGGTCACGAAGATAAAGGTGAAACTTGTTCAAGTAAACAAAATGATAAACTCCGCATTTCGAGCGACG GAGAGAGTGAGAATGAGCTATGTGATAAATCAACTCCTTTACATCAAGCAGCGCAATGTGATGATTCTGAAAAGGTTATGGAACTCCTGGAACAGGGCTT GGATCCTTGCATCAAAGATGAAAGAGGACGTACTCCATACATGCTGGCACATGACAAGGAAGTCCGAAATGCTTTTAGAAGATTTATGGCATCAAACCCT AACAAATGGGATTGGCATGCTGCAAAAGTGCCTAGTGCATTGACCAAAGAAATGGAAGAATCACAAGCTGCAAAGCAGGCGGAAAAAGATGCTAAGAGAA AAGCCAGAGCAAAAGAATTAAAGAAATTGCGTAAAGCAAAGGAAAAGAAGGCTCAGGATAAATTTGGCAACTTCGTGAAAAAGCATGTTGTGCCAATCAT GGGGAAGGTTGTGGTAGGAGCTGCAGTTGTTTGTGCCACCACTGCTATGGCACTAGTGATTTGCCACCGAGTGAGATGCTCTAGCAAGTGTGCTGTGCGA TGAAATTCCAGTGTTTAGTGAAAGTCATCCCAACCTCAAAGCAAAAAGAACAAAGGAGCAAGCACTGAGGAAGTGTGAGAGAAAGTGGGGAGTGATGGAA CAAAGGAGCAAGGAAGAAGTGAAACATGGACGAGGCAGGTTGAAGTAGGAAATGTAGCAGTCACGTGTTTGTCTTTGTTTTTGGTGGAGCACGATTTTAA TTGAGGTTAGGAATTACAATTCATAGGGCATGGGTTAAGAATTTGCTATGGTTAAAATGACTTGTATTTAAATTCATGGATTTGACCCCTGGAATTATGT TTCAAATTCTAAAAGGAATTTCAAGCATGAAAACTAAAAGCCTCAATTCCATTCCTATTCAACATGCGCCAAACATACACTTATTGTTTTATCCCATTGC TTCTGGTTTCAGTTTGAGCTGAATACCTCAGCCAGCTATAGATTTTTTGGAGAATTTTCACATAGAAGCTTCGATTTGCGATATCACTGTTTTTAATCAT GCATGTCTCTACTTGTTTACTCATCAATCTTCATTATTCCCGGTTGAAAATCATTATTTTGACAAACTATTGAATGCTGTGTTCAGGTGGAAGCTGCCTT GCCTAAGAATGCTTCAAAAACTGTAGAAAAACAAGTGACTCCTTCAACATCTTCTATGGGACAATCTCAACCAAAGAGTGGTTTGAAATTATCAAAAGAG GAGGAACGACAAAGAGCGCTGGCTGCCGAAAGAGAAAAGCGAGCGGCTGCTGCCGAGAGAAGAATAGCTGCTCTCAAAATTCAATCTAGTAGTGCAACCA CTGCACCAAGCATTTCAGAACCTGGAAGTGGAATTGCCAGTGACATTCATTGTTCCTGTTGTAATTCATCACTTGCCGGTAAAGTTCCCTTCCACCGGTA TAACTATAAATACTGCAGCACATCATGCATGCATGTACACAGGGAGATCCTAGAAGATGAATGACATTGTGTTTAGATATTTATCTTATAATTTTTCACC TTCAAACTAAGATTTTTCCGAATACCCATTATTGTTCTTGATTTGGTTGTAAAAGTAACCTTAGTTGGAATTTAAAAAGGGAGGGAGAAATAGCTGTGGG GAAGGACTTCAGAGTAAATAACATGATCTGGTGAACTTTACAACAACCAAACCTAGTCCTACTAGTTAGGGTCAGCTAAACGGATCGAATGACGTTATAA TATTCTATCATAAATCATGTTCATTGACAAAACATTGATACGATTAAAGAGGAAAATGATGGGGAAAATTTGAAAAGGGTTTCTCCAAATCATGTGTTTT CCTTCCTACTTTAGTGGAGAAATTCAGTGAATACTAAAGCAGGAGCAGAATTTTGGCCAATATTCATTTTTCCCAACTAGTGCATATTTCTTATAACTAA CAAAGTTGGACTCAGTTATGTGCCTTTCTTCATGTCTGTAATTTTCCCAGAGCTTTCTAGAAGTGGCTAATATCAAATATGTTTTTGAATCTCTTTTATG CAGGAAGAAGCGGGGAAGGCAGGAGTTCTTTAGACTGGGACAGCCGCTTGAGAATTGCGATTGGCGCAGCAAGAGGCATTGCTCACATCCATGCTCAACT TGGAGGGAAACTAGTTCATGGAAACATAAAAGCCTCAAACATCTTCCTCAACTCAGAAGGATATGGTTGTATATCCGATATCGGTTTGGCAACACTGATG AATCCGATATCCCCATCAGCAATGAGATTTGCAGGATACCGTGCTCCAGAAATAATAGACAACCGAAAAGCAACTCATGCATCTGATGTCTACAGTTTTG GGGTCCTGCTACTTGAGCTTCTAACCGGTAAATCCCCTGTACACACAAGAAATGAGGACGTTGTCCCCTTGGTTAGATGGGTGAATTCTGTCGTCAGAGA GGAGTGGACTGCAGAAGTGTTTGATGTACAGCTGTTGAGGTATCCAAATATTGAGGAAGAAATGGTAGAGATGCTACAATTAGGCTTGGCCTGTGCAGCA AGAGTACCAGATCAGAGACCAAAAATTCAAGACGTGGTGATAAGAGTGGAGGAAATTCGTCGTGTAAATACTGGAAATCGACCATCTAGTGAGTGTAGAT CAGAAGTTTCTACCCCAACCCCTCAACCTCACCTCATGCAAATTGAGATAACTTCTACCTCTGTTCCACAGTGAGATTCTTTTGTTTTGGGCAATAATTT TCAATCAATGTCTCATTAGCAATTTTATTCTGAAAAGGAAAAATGATATTTTACCTAGTAGATCTTAGAAGCTCTTGATAAAATAGTTGCTAAGTAGTTA AGCTAACAGCTTTAGCTGATGGCATAACCAAGTTGGGTCCCTAGCTAGTAACTATTGGGCTGTATTATTATTATAATTTATGAATTACTTTTATGAAATT ATCTGCTACAATCAACTGGTTGAACCTGAACATGATCGCGAAATCTTCCCATTCACTCTCTTGTTAACAAAAAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_145697; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_521488
| Blastp | Ankyrin repeat and zinc finger domain-containing protein 1 from Homo with 37.54% of identity |
|---|---|
| Blastx | Probable inactive receptor kinase At4g23740 from Arabidopsis with 58.88% of identity |
| Eggnog | Ankyrin repeat and zinc finger domain containing 1(ENOG410XQAG) |
| Kegg | Link to kegg annotations (55139) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019413113.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |