| Id Trinity | TRINITY_DN46589_c0_g1_i10 |
|---|---|
| Name Transcript | Ll_transcript_521013 |
| Sequence | CTCAATCTTAATTTTAAAAAATAATAAATCAGTAGTTTATTTGAAAAGAGAAAACTCCATAACTGAAACAAGAAATGGATTCTAGGGTTTGGTGAAGCGC AACGCAGAGAGTGAAGAAATGTCGTCACAGTTCTGGAAACCAGGTACCGAAAAGCCTCGTATATTAGAAGACGAAGAAGGTTCCGTTATCTTCTTATCCA ATTCGCTATCATCATCTTCTTATTCTGAGAAACAGAGGCAGCGATTACCTGTGTTCAAGTATCGCAATGCAATTCTATACCTAGTTGAGACTCATGGAAC TACAATAATAGTTGGTGAGACAGGGAGTGGTAAAAGCACTCAAATTCCTCAGTACCTCATAGAAGCAGGTTGGGGCCACGGTGGCCGTCTCATCGGTTGT ACTCAACCGCGGCGTCTCGCGGTTCAGGCCGTTGCGTCTCGGGTTGCGCAAGAGATGGGAGTGCAATTGGGTGAAGAAGTTGGTTACACTATTCGCTTTG AAGATGTTACAAAATCAGTCAGCATCTCTCACTATATACATTTTTTTAATGTTAATTTAGATTCTCCAAATATTATTGATAACAGTGACACTGTTCGCTT TGTTTGGCATGAAATTAGTTTATAACAGTGATATTGTAGCTTATTGCTGTGAATTATCTAAAAAGTGTGAGATTGTAGTTAAAGCTTATGACAGATTGAA GAGTGCTTTGCAAAACTAGCTGATTCAATTAAAGTTTGCAAAAATCAATTGTATTGGGGATAAAAATTGTCACGTGATGAAAGATTATGGGGGCGGGGAT GTGACTGTACTGAAATTTTTAACTGATGGGGTTCTACTAAGGGAGATGATGGATGATCCTCTTTTGACCAAATATAGTGTCATAATGGTAGATGAAGCTC ATGAAAGGTCAATTTCAACTGACATTTTACTTGGACTATTGAAAAAGATTCAACGACGTCGACCAGAGTTGCGTTTGATTATAGCTTCTGCTACTATTGA AGCAAAGTCAATGTCTGACTTCTTCAGAACTAGACACAGACAAAAGTAAGCTGAAAAATGCTAGGTTTCTCTACCAAAGATTACCAGTGGATGAACATCT CTTCCCATAAGCCTTCTACATCTGTCGAAAAAAGCGCCGAGAACCTGAAAATGAGGACAGTCGACTGCAATTGGAACCTGCAATCTTATCAGTCGAGGGT AGAAGCTTCAATGTGCAAATTAATTATGCTGAGGAACCTGTCCACGACTATGTTCAAGCTGTTGTTTCAACAGTACTCTCGATTCATGAAAGGGAGTCCA CAGGAGATGTTCTAGTCTTTCTTACTGGCCAAGATGATATTGATGCTGCTATTCATTTACTTAATGAAGAAGTTCAAAATAATGGCAAACGATCTTCAGG TACACTGTACACACCATAAATAGTTCTATTTAGACTATTAGCTTT BLAST |
| Tissue | pods |
| Gene name | LI_gene_145710; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_521013
| Blastp | Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 from Arabidopsis with 75% of identity |
|---|---|
| Blastx | Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 from Arabidopsis with 76.4% of identity |
| Eggnog | helicase(COG1643) |
| Kegg | Link to kegg annotations (AT4G18465) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_004485864.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |