Ll_transcript_521015

Id TrinityTRINITY_DN46589_c0_g1_i11
Name TranscriptLl_transcript_521015
SequenceCTCAATCTTAATTTTAAAAAATAATAAATCAGTAGTTTATTTGAAAAGAGAAAACTCCATAACTGAAACAAGAAATGGATTCTAGGGTTTGGTGAAGCGC AACGCAGAGAGTGAAGAAATGTCGTCACAGTTCTGGAAACCAGGTACCGAAAAGCCTCGTATATTAGAAGACGAAGAAGGTTCCGTTATCTTCTTATCCA ATTCGCTATCATCATCTTCTTATTCTGAGAAACAGAGGCAGCGATTACCTGTGTTCAAGTATCGCAATGCAATTCTATACCTAGTTGAGACTCATGGAAC TACAATAATAGTTGGTGAGACAGGGAGTGGTAAAAGCACTCAAATTCCTCAGTACCTCATAGAAGCAGGTTGGGGCCACGGTGGCCGTCTCATCGGTTGT ACTCAACCGCGGCGTCTCGCGGTTCAGGCCGTTGCGTCTCGGGTTGCGCAAGAGATGGGAGTGCAATTGGGTGAAGAAGTTGGTTACACTATTCGCTTTG AAGATGTTACAAAATCAGTCAGCATCTCTCACTATATACATTTTTTTAATGTTAATTTAGATTCTCCAAATATTATTGATAACAGTGACACTGTTCGCTT TGTTTGGCATGAAATTAGTTTATAACAGTGATATTGTAGCTTATTGCTGTGAATTATCTAAAAAGTGTGAGATTGTAGTTAAAGCTTATGACAGATTGAA GAGTGCTTTGCAAAACTAGCTGATTCAATTAAAGTTTGCAAAAATCAATTGTATTGGGGATAAAAATTGTCACGTGATGAAAGATTATGGGGGCGGGGAT GTGACTGTACTGAAATTTTTAACTGATGGGGTTCTACTAAGGGAGATGATGGATGATCCTCTTTTGACCAAATATAGTGTCATAATGGTAGATGAAGCTC ATGAAAGGTCAATTTCAACTGACATTTTACTTGGACTATTGAAAAAGATTCAACGACGTCGACCAGAGTTGCGTTTGATTATAGCTTCTGCTACTATTGA AGCAAAGTCAATGTCTGACTTCTTCAGAACTAGACACAGACAAAAGTAAGCTGAAAAATGCTAGGTTTCTCTACCAAAGATTACCAGTGGATGAACATCT CTTCCCATAAGCCTTCTACATCTAAAAAAGCGCCGAGAACCTGAAAATGAGGACAGTCGACTGCAATTGGAACCTGCAATCTTATCAGTCGAGGGTAGAA GCTTCAATGTGCAAATTAATTATGCTGAGGAACCTGTCCACGACTATGTTCAAGCTGTTGTTTCAACAGTACTCTCGATTCATGAAAGGGAGTCCACAGG AGATGTTCTAGTCTTTCTTACTGGCCAAGATGATATTGATGCTGCTATTCATTTACTTAATGAAGAAGTTCAAAATAATGGCAAACGATCTTCAGGGTTG GTTCTTTTGCCTCTGTATTCTGGACTTCCTCGTGCTGAACAGGAGTTAGTGTTTTCTCCAACTCCTAGAGGGAAAAGGAAAGTAGTAATTTCTACTAATA TAGCAGAAACATCACTCACACTGGAGGGCGTTGTGTATGTTGTTGACAGTGGATTCTCAAAACAGCGATTCTACAATCCGGTTTCTGATATCGAAAATCT GGTTGTGGCACCAATATCTAGAGCTTCTGCTAGGCAAAGAGCTGGTAGGGCTGGACGAGTTCGACCTGGAAAGTGTTACAGGCTATATACTGAAGAATAT TTTCTAAATGAGATGCCTAATGATGGAATTCCAGAGATACAGAGATCAAATCTTGTCTCATGTGTAATCCAGTTGAAGGCCTTGGGAATTGATAATATAT TGGGCTTTGATTGGCCAGCATCTCCGTCTCCTGAAGCAATGATCCGAGCATTGGAAGTTCTTTACTCACTCGGGGTCTTGGATGATGATGCTAAGCTTAC TTCACCAGTTGGATTTCAAGTTGCAGAGATTCCACTTGACCCAATGATCGCAAAAATGATAATAGCTTCCAACCAATTTGGGTGTTCAGAGGAAATAATC ACAATTGCTGCTGTTCTTTCCATTCAATCTATCTGGATCTCAGGGAGAGGGATACAAAAGGAATCAGATGAAGCTAAATTGAGATTTGCTGCTGCAGAGG GTGACCATGTAACATTCCTTAATGTATATAAGGGGTTTCTTCAGTCTAGTAAATCTTCACAGTGGTGTCACAAGAACTATGTGAACTACCAAGCGATGAG AAAGGTTATTGAGGTTAGAGAACAACTCAAAAGAATTGCACATAGGATAGGCATAGTCTTAAAATCTTGCGAAAGTGATATGCAGGCTGTTAGAAAAGCA GTCACTTCTGGCTTTTTTGCTAATGCGTGCAGTCTAGAGCCATACAGTCATAATGGGATGTACAAGACGTTAAGAGGATCACAAGAAGTTTATATTCACC CATCATCCGTGCTATTCAGGGTAAATCCAAAGTGGGTTATTTACAATTCTCTTGTATCAACTGACCGACAATACATGCGTAACGTCATAACTGTCGATCC CTCGTGGCTATTGGAGGCTGCTCCTCACTTCTATCAGTTACAGCAGTCTAATCCTCTTTTCTGATTCCCTTACCATTACTAATTGGAATAGATTGTTATC ATATATCAACTCAGTTCAAGTGGATCAGAATTATGTACCTTTTGTTGCTTTTGAAGAGTGAGTTTCATCTCAATTATTACAAATTTATGACCAAGTCATT CCATAACACCTGCACCAAACTAACCACATTACTAACCAGTGTCTGTAATTGTCTCCTTCACAATTGGTATTTCATTTTTAAGGTTATGTATACAATTTTC TGAAGTGAAAATGTTAAGCTTCAGTTATATCCCTATATATGTTTATAGATTGGTATGTGTTCTTGAATGCATGGAATAATAGGGGTACTTGTGTATGACC CATAAAAGTTGAAAAACCAAATATTATTGCAGGATTTTGGATACTTAGCTTAAATATCCATGTACGATTTGTCACTAAAT BLAST
Tissuepods
Gene nameLI_gene_145710; 
Additional informationdetails; 

Expression of Ll_transcript_521015

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_521015
BlastpProbable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 from Arabidopsis with 78.85% of identity
BlastxProbable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 from Arabidopsis with 73.6% of identity
Eggnoghelicase(COG1643)
KeggLink to kegg annotations (AT4G18465)
CantataDBLink to cantataDB annotations (CNT0002241)
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019440202.1)
PfamHelicase associated domain (HA2) (PF04408.22)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;