Ll_transcript_521016

• Id Trinity: TRINITY_DN46589_c0_g1_i12
• Name Transcript: Ll_transcript_521016
• Sequence: GATGTGACTGTACTGAAATTTTTAACTGATGGGGTTCTACTAAGGGAGATGATGGATGATCCTCTTTTGACCAAATATAGTGTCATAATGGTAGATGAAG CTCATGAAAGGTCAATTTCAACTGACATTTTACTTGGACTATTGAAAAAGATTCAACGACGTCGACCAGAGTTGCGTTTGATTATAGCTTCTGCTACTAT TGAAGCAAAGTCAATGTCTGACTTCTTCAGAACTAGGTATTGTTCTGATCTTGCTGTTATAATTGTTCTTCCTTTTCTTTTCCTTTTAAACACTTCATTG GAAACTGTATTTACAGAATTGGTCTTTATTGGAAAATAACACTATAATATTTTATCAGATAAAACAACCTAAAGTGCAAATGTTTGATTTTAAGATTCAC CTGGTTTATGTTTAGACACAGACAAAAGTAAGCTGAAAAATGCTAGGTTTCTCTACCAAAGATTACCAGTGGATGAACATCTCTTCCCATAAGCCTTCTA CATCTGTCGGTATCTTAATACCTATTATTATATAGTGTGTATTTGAAATTCTTGTTGATTCATTCCTGTCTTGAATCTTGAGTAAGTAGGTTTTGATTGT AAACTAAAAAGCATTCACTGGTTAAACCATCTATATGCTGTAAACAGAAAAAAGCGCCGAGAACCTGAAAATGAGGACAGTCGACTGCAATTGGAACCTG CAATCTTATCAGTCGAGGGTAGAAGCTTCAATGTGCAAATTAATTATGCTGAGGAACCTGTCCACGACTATGTTCAAGCTGTTGTTTCAACAGTACTCTC GATTCATGAAAGGGAGTCCACAGGAGATGTTCTAGTCTTTCTTACTGGCCAAGATGATATTGATGCTGCTATTCATTTACTTAATGAAGAAGTTCAAAAT AATGGCAAACGATCTTCAGGGTTGGTTCTTTTGCCTCTGTATTCTGGACTTCCTCGTGCTGAACAGGAGTTAGTGTTTTCTCCAACTCCTAGAGGGAAAA GGAAAGTAGTAATTTCTACTAATATAGCAGAAACATCACTCACACTGGAGGGCGTTGTGTATGTTGTTGACAGTGGATTCTCAAAACAGCGATTCTACAA TCCGGTTTCTGATATCGAAAATCTGGTTGTGGCACCAATATCTAGAGCTTCTGCTAGGCAAAGAGCTGGTAGGGCTGGACGAGTTCGACCTGGAAAGTGT TACAGGCTATATACTGAAGAATATTTTCTAAATGAGATGCCTAATGATGGAATTCCAGAGATACAGAGATCAAATCTTGTCTCATGTGTAATCCAGTTGA AGGCCTTGGGAATTGATAATATATTGGGCTTTGATTGGCCAGCATCTCCGTCTCCTGAAGCAATGATCCGAGCATTGGAAGTTCTTTACTCACTCGGGGT CTTGGATGATGATGCTAAGCTTACTTCACCAGTTGGATTTCAAGTTGCAGAGATTCCACTTGACCCAATGATCGCAAAAATGATAATAGCTTCCAACCAA TTTGGGTGTTCAGAGGAAATAATCACAATTGCTGCTGTTCTTTCCATTCAATCTATCTGGATCTCAGGGAGAGGGATACAAAAGGAATCAGATGAAGCTA AATTGAGATTTGCTGCTGCAGAGGGTGACCATGTAACATTCCTTAATGTATATAAGGGGTTTCTTCAGTCTAGTAAATCTTCACAGTGGTGTCACAAGAA CTATGTGAACTACCAAGCGATGGTGTGTATCTGTTTTGCAACTTTCAACTGGTTCAGTTTGTCCTTTTTTGCTAATTCTTCTCGAAATGGTGACTTAAAT TGCAGAGAAAGGTTATTGAGGTTAGAGAACAACTCAAAAGAATTGCACATAGGATAGGCATAGTCTTAAAATCTTGCGAAAGTGATATGCAGGTTGGTTT TCTGATATTTCAACTGGTCTATAAAAAGCTCTTCCAGAAAATGCATGCAATATTCTCTTCATTTATTCCTTGTTGTCTTCCTGAATAATTGAGTTAGATT AAGCTATACCCAAATGTAATTATTCTTACTTACATATCAGGCAACTTTCTTTGGTTTTTCAACCTACAATATGTTTTCACTTTCAGTTCCTTGATTTCAA TTTTAAAGTGATTTAATTTTAACTAGTTATACTTTTGACAGGCTGTTAGAAAAGCAGTCACTTCTGGCTTTTTTGCTAATGCGTGCAGTCTAGAGGTGAG TGACTTCTTGATTAGGACACAAATGTTATTTATGATAGATCATAATGGCATAGTTCGACCCATGTAGCCGATATTACCTAGTGGGATTAAGACTTGGATG TTGTTGTAAAGTTTTGCCGTATATTAAATTTTGTGTGAATCAAAATAACTTGACTTGTTGGCTATTTTATTTTTATCCGTGCTTGGTTAAAAGCCATACA GTCATAATGGGATGTACAAGACGTTAAGAGGATCACAAGAAGTTTATATTCACCCATCATCCGTGCTATTCAGGGTAAATCCAAAGTGGGTTATTTACAA TTCTCTTGTATCAACTGACCGACAATACATGCGTAACGTCATAACTGTCGATCCCTCGTGGCTATTGGAGGCTGCTCCTCACTTCTATCAGTTACAGCAG TCTAATCCTCTTTTCTGATTCCCTTACCATTACTAATTGGAATAGATTGTTATCATATATCAACTCAGTTCAAGTGGATCAGAATTATGTACCTTTTGTT GCTTTTGAAGAGTGAGTTTCATCTCAATTATTACAAATTTATGACCAAGTCATTCCATAACACCTGCACCAAACTAACCACATTACTAACCAGTGTCTGT AATTGTCTCCTTCACAATTGGTATTTCATTTTTAAGGTTATGTATACAATTTTCTGAAGTGAAAATGTTAAGCTTCAGTTATATCCCTATATATGTTTAT AGATTGGTATGTGTTCTTGAATGCATGGAATAATAGGGGTACTTGTGTATGACCCATAAAAGTTGAAAAACCAAATATTATTGCAGGATTTTGGATACTT AGCTTAAATATCCATGTACGATTTGTCACTAAAT
• Tissue: pods
• Gene name: LI_gene_145710;
• Additional information: details;

Expression of Ll_transcript_521016

FPKM

• PAB: 0
• PNAB: 0
• PS1: 0.3
• PS2: 0
• PS3: 0.7
• PW1: 0.3
• PW2: 0.2
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_521016

• Blastp: Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 from Arabidopsis with 81.48% of identity
• Blastx: Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 from Arabidopsis with 77.93% of identity
• Eggnog: helicase(COG1643)
• Kegg: Link to kegg annotations (AT4G18465)
• CantataDB: Link to cantataDB annotations (CNT0002241)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019440202.1)
• Pfam: Helicase associated domain (HA2) (PF04408.22)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;