Ll_transcript_522177

• Id Trinity: TRINITY_DN46591_c4_g1_i9
• Name Transcript: Ll_transcript_522177
• Sequence: CAAAATAATATTTATTATTAGTTATTGGTTTTTAAGATATATATGATTTTTAGTTTTTCCCTTTATTTTGTGCAATAGGTATATTATTACTCAAATATGT TTTTTTTCCTTAGTAAGCAAGAGGGGTTGGTTATATGAGAGCCGTTGATTTACATAAGAAACTTAGGTGCAGTACTAATGATATAAGAACTAAACTCAGG TGCAGTACTGTGAGTACTAATGATAGAGATTTACATAATGATAACTGACTTATATTGATAATAATGCTCTTAGGTATCACCTCCACTCTCCAAAACGTCA CCCTTTCATCCGAACTGGATCTCCCACCGCCGCTAACAACCCTCTCTCCATCTCCAACGAATCCCTCCACTCCTGCGGCTTCATCTTCTGGCGCAGCCCC GATGGACTCAACCTGGACCACCTAAACACAATCTTCGTCGCGTAGCGTTTTATTCAGAGGCAAGAGTTGTTGGGTTCTATCATTTATTCAGAGGAATGGT GTATTCCACCAAAAACATAAGAGCAGGGGTGGAAAATTATTGACACGTGTCATTATATGGTTGGGTACCAGTACTACCAGTACTTAAGGTGTGGAACTAA TTACTGAACTATTAATAAGGATTTTCATCGTTTCGTCCGACCTGGGAAAAACAGAGGCAAGTGAAGTCAGAAACTTATCGAAACGACAGAGGTTAATGTT GTTGCGCCTTTTCAACTCTTCCTTTTTGACAAAGACCCTTCCCAACTTCAATCTCTCTAAATCAACATCCATGGCATCTTCAGCTATAGAGTGCAGTTCA AGTTGCATGCTGGTTTTGTGCGGAAAATCCAACACAGAAAATGAAGCTGCTAAAGCTATTAAGATCAATAACACTATCAAGCTTTCTCAAAGTGGAGATT TTTCTGTTGTTTTGCATTCTGAATTGGATAAAACAGATATGAAACACTCTTTTCAAGTGGATTCCTTCATGAATTCTCTTTCCACAAACACATTTGGAAG GTTTCTTATCTGGTCTCCACAGTTAGACACAACCCATGATGTTGTTTCAAACAACTTTTCTGAGCTTCCCGTTGGTACAGTTTGTGTTGCTGATGTTCAG ACCAAGGGACGAGGCCGGTCAAAGAACGTCTGGGAGTCTCCTTTAGGCTGCCTCATGTTTTCTTTTACCCTGCAAATGGAGGATGGGCGGGTTGTTCCTT TAGTCCAGTATGTGGTTTCTCTGGCTATCACAGAGGCAGTGAAGGATATCTGTGACAAAAATGGATTACCCTTCCTTGATGTTAAAATCAAGTGGCCAAA TGATATTTACTTGAATGGCTTTAAAGTTGGAGGCATTCTATGCACCTCAAAATATTCATCAAAGAAGTTCAATGTCAGTGCAGGTATAGGCTTGAATGTC AATAATGAGAAGCCGACAACATCTTTAAATTCAGTTCTAAGAGAATTGTCAGTTGAAGGTTACCAATTTCGAAGAGAAGATGTTCTGGCAGCCTTTTTCA ACAAATTTGAGAAATTTTATGAGCTATTTATCAACCAAGGTACTCTGATAATTGTCCCGTTAAATTGTTTTTGTTATCATCTCCAACATCAGGTTCCAAT TCTGATTATCATCATCTTACTGCGCCTATGTTTATCTCTCTCACTGTAAACCCAGATAGATAAAATCTTCTAATAATCTGAAATCAGCATGTGGAGTTAT CCTTCTCATACTTGTGTATTAATCACATTTGAAGATTACAATGGCCTTGGTAGGAAACTGTCGTTTGGGTATGGACCGTTAGTGTAAAGCCAACTTTTTT TTATATTTGAAACGGTCTAAACCCATTGAAATATATAGAGATGGTAATTTGGGAATTTATGTTTGCTAACACATTTTGCATAGCATTTGTCTATCAACAA ATCCTTGGGAGGGAAAAAGGGGTGTAAAGTATAGGACAAAGGATGCACCTTTGCCGTATATAATGACTGTTTCTTGTTTGTTACCCTTACAGGTAGAAAA TTAGCCCCAATTTTCCCTCAGTTTGGATAATTATTTTCCTATTTTAAATGCTTTAGGATTTTCTTTTAAAACCCTGTACTCTTGGCACAATGGTAATGGT GCTGTGTTGAGGTCTTATGGTCACATACTCACATTCTTAGTCATGGAAATATCCTCTCCACTTACAGGTAAGGTTGTATACATTGGACCCTCCCCAAAGG CCCAAACACTCGAAGTGTAGGAGCCTCTTACAATAGGTCACTTGTACCTTAGTTTCTGTCCAAAATGAAGAAGGAAAAAAGAATCATACTCTTAGCTTGT GAGACCTGGATCACATGATGTTTTCATGTTGTCTCCTATTCTTTTCTCGGTCTCTTTTTTCAATCCATAGTCTATGCTTTGTCAGAGGAACTGAAAAGAG CAAGTGTAGATGTCTATTTTGGTCCTCCAAAGATGGACATGCCACTAGGTTTCTACTCCATTTATAAAAACATCAAATTTGTCTTTCAATATCAATTTAT GCTATCAAGTCGGTCTTTGAAGTGACATCAACTTGTCCCCTAAAGAACAAGACTCTTAACTATCATTGGAGAACATGGAAGTCCATTGTGATGTCACAGG CATCTTTAGTGGTCTAAAATAGACACTCCAAAATAAATAATAAATAAATATACAACCAAAATGGTATTTTTCCGGTTAATGTGTTACAATTATGTTGTTT CCAGACTTCAGCAGAGTTTTCTAAAACTTACTGTATTTTGTGTTGATTACTAACCGATGGGCATGTCTCCCGACACTTTTACATAATGAAGGTAATTTTG AACTTTGCTTGTTCTGTTGAATGCAGGGTTTCAAACCTTGGAGGAACTATATTACAAGACATGGTTGCACAGTGGTCAGAGAGTTATCGTACAGGAAAAA AACGAGGATACAGTATCCGAGCATGTCGTAACTATACAGGGTTTGACATCCTCAGGATATCTGTTGGCAATTGATGATGACAATCAAATGTGTGAGCTCC ACCCTGATGGCAATAGCTTTGACTTTCTCAAAGGACTGGTCAGAAGTAAACTCAACTGAAGAAGATTCCTTGTCACATTTCATTCAAGGCAACAACCCTT ACACCCACTTTGTATATATTGCCAAGGTCTTGGCTTTATTGCTAAAATTTTCCAATAAATTAAATTTTTAGTGCTTTTGTATTCCATTTGTGAAACTTGT TGTTTGGTCAAACAAGTTCTTCTACCCAATGGCATGTAATAAAACATAAAAACATCATGGTTGCAACCAAAAGAATGAATTTTTCTTCTTCTCTTAGTAG GACTTAGTGCATGATTACTTTATTCAATTATTGGTTAAGTAATGTGGTGGTGATTGCTTTATTCAATCATTGGTTAAGTATTGTGGTCGTC
• Tissue: pods
• Gene name: LI_gene_145725;
• Additional information: details;

Expression of Ll_transcript_522177

FPKM

• PAB: 1.6
• PNAB: 1.6
• PS1: 1.4
• PS2: 2.3
• PS3: 2.9
• PW1: 3.3
• PW2: 0.5
• PW3: 0.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_522177

• Blastp: Biotin--protein ligase 1, chloroplastic from Arabidopsis with 64.5% of identity
• Blastx: Biotin--protein ligase 1, chloroplastic from Arabidopsis with 65.85% of identity
• Eggnog: Biotin- acetyl-CoA-carboxylase ligase(COG0340)
• Kegg: Link to kegg annotations (AT2G25710)
• CantataDB: Link to cantataDB annotations (CNT0002087)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019433158.1)
• Pfam: Biotin/lipoate A/B protein ligase family (PF03099.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;