| Id Trinity | TRINITY_DN46592_c5_g1_i12 |
|---|---|
| Name Transcript | Ll_transcript_521677 |
| Sequence | AATTGATGGGCCTGGGCCTGGGCCTGTACTTATCAATTCACCAACATCTGTTTATTAATATTGAAGCCCATACTCTGTTATAACAACTTTATTTGCAGTA TTTTCTTCAACAAATATTCATTCCCCACCCTATTCAAGCTAATCATAATAATTGATATAGAACATGTTTGAGGATATGAAAACATTAGAACAGTCCTTTT ATTATTACTTTATTTAATAGTGCAAAATTGAATATATACAAATTATTTCTATACCTGCTCTGATTTAAATTAAAAAATGAAGTGTATGAAATTGTAGATT AGACTCTCATCAATAAAAAAAGTCATAATTTGAAGAAAAGGACGGTACATCTGTTCAGCCTTCCTCAGATCAGACCTACCCATCTGCCTCCGCTGTTCCA CTTTTCTACGCCGCCGTCTCTCCTCGCCGCAAGAGGTAGTTCAGTGTCTCACACCCTTCCACCTCCTGCTCACAATCTCAGTATAGCACCTATTCCTAAA ACAGGTCTTCCTCAGTCCTTGGTTTGGTTTACTATCGGTATTGATCTATTCTACATCCCTGTTGATCAATATGCAATTCTTTGGGGGGTCTGAGATCAGT CCGTCACCACCTGCGCTCACAGCTTCTGGAAACAATGGCCATATGATGTATGTGTTCAATAGGAATGGTGTATGCTTGCTCTATAGGGAATGGAATCGTC CGCTTCGGACGTTGAATGCCCAGCAAGACCATAAGTTAATGTTTGGGCTACTTTTCTCGCTTAAGTCGTTAACTGCCAAGATGGACCCCACGAGTGCTGA GAAAGGAAATCTTGGTGTGCCCCAATTACCTGGCCAAGGTTGTTCATTTCACAGTTTTCGCACTAATACATACAAGCTTAGTTTCATGGAAAGTCCTTCT GGGATAAAGGTAAGTTTCAATGATATTCTCGTTCCCTTACATTGGCTTTTGCACATTTATTCATTGATGATTCTAGCTATTTTGGCACTTTGTATTTATC TTATATATATATGTATATATTAATCCCATTTTTAGTCATAAAAATGTTGGATTTATTGATCTAATTTGCGAATGAAAAACTGAAGTGACATGGAACATTA AAAGTAAGAGAAGAAATTTTTTTGAAGGAATATAAAAGTTTAAACACCATATTTTGATCTTTGGATTTTTTGAGAGATCTAATTTTGTGTGACTTGCAAG TTCCTCTGTGTATGAACCAAATATGAGGACGATTGGTTTTTGGCTTTACCACTTCAATGTGCCTTGTGAAGTTGCATGTTGACTGTAGAAAAATAACCAA CTAACCATGTTTATATGTTCCTTATTGTCTTGGTTTGAGGCCTTGAAATGAAGAAATAAGAGATGCTTTTGTTTTGTATGAAGAGGAGTGCATATCATGC TGCTTAAGTGACAGTGATTTTGGATGCTTCTGGTGTAGGCTGTTTGTGATCCTTCTTGGAAGAGATAAACCCATTGTCCATTGTATTTTCCAACATTTAT GCGTCTAAAGTGGTTATATGATTTGAGTAATCTACCCTTCAACCATTTGGAGAAAAAAAGAAAAACCTGTAAGCTGCAATGATATGAAACAAGAAGGGGG AGGCCAAGGGAAACAGAATGCTCTAAATTATTTCTGATACACTTATGAAAAGATTCATAAGCCTAAAATGAATAATAAAATCTATAGTGGAAAGTCCAAT TTTCCTAATTTTACAACTGTAAGTGACCAAAACTCTAGATTATGTGCTCAAGAAATTTTAATTCAAAATAGGAAAAAAAAGTTGTAATCTGACTA BLAST |
| Tissue | pods |
| Gene name | LI_gene_145741; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_521677
| Blastp | Trafficking protein particle complex subunit 1 from Rattus with 39.17% of identity |
|---|---|
| Blastx | Trafficking protein particle complex subunit 1 from Rattus with 41.23% of identity |
| Eggnog | trafficking protein particle complex(ENOG4111X41) |
| Kegg | Link to kegg annotations (287427) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019449715.1) |
| Pfam | Sybindin-like family (PF04099.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |