| Id Trinity | TRINITY_DN46595_c2_g5_i1 |
|---|---|
| Name Transcript | Ll_transcript_521291 |
| Sequence | GTTTTTAATAAATTTATGAGCAATATTGACTTATTTACATTTTGATATATAAATAAGGAAAAAAGTTATAATTAGGCAAAGAAAGATGGTAGAATTTATA AAGAGGAGAGAAATGTGTAGAATTTTAGAATAAAAGGTGTTTAGAGAGGGAAGTGATGATAAACCCTAGGTAGGAAGAGAAATGGAGGAAGATTCAAGTA GTAGAAATGTGTAGAATTTTAGAATAAAAGGTGTTTAGAGAGGGAAGTGATGATAAACCCTAGGTAGGAAGAGAAATGGAGGAAGATTCAAGTAGTAGAA AGAGTGAGAGTGGAGGAGGAGGGTACGTGGCGGGTGAAGAAGCAGGAGAAGGGCTACCGTACGCACCGGAGAATTGGCCTGAAGAAGGTGACATATGGGG ATGGAGAACGGGACGGAGAGTTGCAGGTAACGGTTACTTCCAAGATCGCTATCTCTACCTTCCAAACAGACTCTGTCCTACACTTGGCTCCCGCAAGAAG AGGTTGAGTTTCGCAAGCAAGCTTTCTGTTCAACGTTACCTTACTAACAATTTCCCTAATGCTCATATTCCTTCTTTCTTCTCTTCTTTCCAATGGAAGA TTCCTCTTATCCACTCTCCCTCTTCTCATGACAGTGCGGTGCCTATAGCTGCTGTTCCTCTTCAGCAGATCGCGCAACAACAGTCAGACTCGGATATTGA TGTTGTTAAATGCAAAGCTGGGAATAAAATGTGTCACGGCCTGATACCGCAAGAAGTGGAGAAATATTCACTGGTCATGCCTTGTGATATGTGTTGTACC GAACCTGATTTTTGCCGTGATTGTAGCTGCATTCTTTGTTGCAAAACTATCAGTTCAGCCTATGGCGGCTATAGTTACATCAAGTGTCAGGTAAAGCATG GTGATGGTATATGTGCCCATGTTGCGCATATGGAATGTGCTCTTCGATCTCGCATGGCTGGCACGATTGGAAAAAGTATTGGGTTAAATGCTGAGTACTA TTGCCGACGTTGCGATGGGAGGACTGGTCTGGTTTCTCATGTTAATAAGCTTCTAGAAACATGTAAAGCCACTGATTTGGATGAGGAGATTCGGAAAAAG ATCTTGAATCTTGGTGCTTGTCTCTTGCGTGGTTCACGGAAACCTGATGTGAAGGAGCTGCTGAGTCATATTGAAATGGCAATCTCAAAGCTTAACTGTG GGACCTGGAATCAGGACAATCTTACTGCTCATTCTACAGGTAAATGTCATCTCTTATTACATAGTTGTAAACATTTTACTACTTTTCACTGCTGCTAGTT TTATGCTTATGTAGGTTCAGAACTACAGATGTCAGTTCTTTTTGGTCTTTGGCTAGACTTTGGAAATAGAAAATGACAGTTGATCATCTTGCACATGTCT GACCATCACAGATGTTCTAAATTCAATTGTATCAGCACCTTCGTCTTAGTGATGAATATTTTGTTATTAAACAGGCTTATCAGATCATGACAATGATGCA ATGGAAGTCGAAGTCAATGGAGGCCCAACTTGTTCTAGAAATGGCTCTGAGGAATATTTACCTCAGTCATTAAAGCTCGAGGCTGAGATTGATGAAATTC TCCATGCTCTTAGAAAGTCACAAGAGTTTGAATATGACGTTGCTGAAGGAAGACTCCAAGCACATAAGACTTATCTGTGGAACTTGTATCAGCAATTGGA CAGTGAAAAATCTAAATTGGCATCTCAAAACTCATCTCATTCAGATGCCTTGTCTCGTGTTGTCAGAGAAAGAGAGCAACAGATAAGACGAGAACTGATG AAACTCGAAGTTATGAAGAAGGTAGCTAATGGGTTTGGCAGGACATCTAAAGATGTTTTAAAGGAGTGCTTTGGCTTAGAAATTGCAGATTAAATTGACA AAACTTCTTAGCTTCTGGCAATTTGAATTTTTCTGCTCTTTTCATTGTATTGGCATTGAACTATATTCACTATGCCACCAACTTGTGTTTTTCTCCAACC ATAATCATGTGGCATTTGACTGATTTTTATGAGACTTTGTTAATTTTCTTGGGTTAGTTTATCTGTACATCATATTTGACACCTACACATTTATCTGTCC AGTTTTTTTTTTCAAAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_145765; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_521291
| Blastp | Protein OBERON 1 from Arabidopsis with 28.28% of identity |
|---|---|
| Blastx | - |
| Eggnog | OBERON-like protein-like(ENOG4110PA9) |
| Kegg | Link to kegg annotations (AT3G07780) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019444560.1) |
| Pfam | PHD - plant homeodomain finger protein (PF07227.10) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |