Ll_transcript_522256

Id TrinityTRINITY_DN46599_c0_g1_i17
Name TranscriptLl_transcript_522256
SequenceCTTCGGTCTTTTTTAATTCCATTCCGTTCTTTCTCTCGACTCGTTCCTCTAAAACCCTAACATTCGAAGCTCTCATCTCAACGCGAACAATCTCCTAACC TAAGTGAAAATGAGTAGACATTCAAGCAGAACTATCTACGTTGGGAATCTACCAGGTGATATTCGTGAAAGAGAAGTTGAAGATTTGTTTTTTAAGTATG GACACATAGCTCACATTGACCTAAAGGTTCCACCAAGGCCCCCAGGTTATGCATTTGTGGAGTTTGAAGATCCTCAAGATGCTGAAGATGCTATTCGTGG GCGTGATGGCTATGATTTTGATGGGCACCGATTACGGGTTGAGCTTGCACATGGTGGGCGTGGTAATACATCTTCAAGAGACCGATATGATAGTCGCAGC AATGGACGGGGTGGAGGCGGACGTGGGGGCGGGATATCTAAGCGCTCTGATTATCGTGTTCTTGTCACGGGGTTGCCCTCTTCAGCTTCCTGGCAGGATC TTAAAGATCACATGCGAAAGGCAGGGGATGTTTGCTTCTCCCAAGTTTTTCGTGATGGAAGAGGTACAACTGGTATTGTTGATTACACAAACTATGATGA CATGAAATATGCTATCAAGAAGCTTGATGACTCTGAGTTTAAGAATGCCTTTTCCAGGGGTTATGTTCATGTGAGAGAATATGATTCAAGGAAGGACTCT AGAAGTCCTAGTCGTGATCGATCTTATTCCAGAGGAAGAAGCTATAGTCGCAGTCGTAGCCGTAGTTACAGTCCGGGCCACAGCCGAAGTAAATCTCCAA AGGGCAAATCTTCACGCAGTAAATCTCCAAAGGGCAAATCTTCACGCAGTAAATCTCCAAAGAGCAAACCTTCACGGCTTTCACCAGCTAAATCTCCTCC GCGGTCTGCTTCTCATTCTCGCTCAAGGTCAAGGTCCCGCTCTTTATCAAGGTACAAATTTTTATTTTGAATTTATGCCATATTTTTGTCCATTACTATC TCTCCTATGCTTTGCCTTTTCAGGTATTGTTTTTATGATTGATACTGTTATTTGGTATATCCTAATGGCTAGTGAACCATTTATCAATCTGTTTGGACCT TCTTAGGAATGTGCACTGTTCAATAGAGCTCACCCAGAAAAGGCATATGGAATGGGGGAACACAGGGTACCATGGATATCCATAATGAGCTGAATATAAG TAATTGGGGTTTTAATTGACGGACCAATTGAATTCTTTTGTGTCATGTCTTAGCAAACATAATTTTAACACCTCAATTTCACCAACTACCAAGTCCTGTT GAAGTCAGTTATGTTTACCTTATGTCGCTTGTTTGATAAGTATAAAGACTGTTACTTGTTACATTCAACACCTTCCCCCATCGACAATAAAAGAAAATGA GAATTTTGTATGTTAATACAACATTATTAATCTGTTATTCTCAATAAAAAAATCCTGACAAACTGTTGCTCTCTTCCCTTTCCCTCTGTCTGTTTTTCTT TCTTCCACACTTGGTTTGCGGGTTCCTGACAGAACATCCCTCCTAGCCATCGTGTTCACTTTCACTCTCGTTTTACTTTTATTTTTTAAGAATTCTTTTT TATTTTTGTGGTTTTTTATCCTTAGACATGGATACTTCAAGCAATCTGGGAATTGAAAATTAGAAACTTGATTGGATATGGTTCCAGTTGACTGCAACTC AATTTGTTGTGGAGGTATGATATTTTTTTAGATGGGGGCTTTGGATCCCTTCAAAGTACATCTGTTCTAATGCTTTTAGCTTGTAAATGACCCTGGGTGC TAGATTGGGAACAAAGGAGATCATCAATTGCTATTTTATAGCTGCATGTATTGTGTATAAAGACAACTGGGATTTGGGAATCACCACCAATGAGCAATAG AAACACTTTCCATATGATGTTGGCTTCAGGATTCGCCAAACCAATAGGGTGCAGTATCTGGATTCTCTGGATTTTGTGGTGCAATAGGGAAGATTTCTTG TATCCAGATCTCTGTTTTAATATGTTAGTTTGTGATGCTCATGCATAGGATGTCTACAAATTTCCCCTTTTTGCTTTCTCTACCTCCCAGGTTGCTATCT AATTTACAATGTTTGTTTTTACCTCTTCTGGGCATGATATGTGACTTGGGAGAGGAATCAAGGCTGTTGGATTCTATTTGATAAGGGAACTTGTGGATTT TTAAATTCTGTTTGTGGAACTTTTGCAGATCACTATCAAGATCAAGGTCTCCTTTGCCATTGGTGAGTGAATTCTTTATAACTAATTAAATGTTATTTTG CTGCATATATAGTCTCTTGGCTTGATTCAATCTTGTGATTTGCAACATAAAATGGGGAGCTTAGCCTCTTATAGTAGTCTAACCATAAGAAGAATCATTT GTCTTAGTGAGCAGTGACTGAGAACTCTTGATAAATTGTTTTTCCACTGAAGTGTGATAGAAAGCATATTTAAAAACTCCTCCCCAATTAATATATATTT TGTCAGCGTAATAAGAGCCCAAAAGGACGCAGTGCTAGCAGAAGCCCAAGAAAGAGTCCAAAAAGGTGCAGTGCTAGCAGAAGCCCAAGAAAAAGCCCAA TAAGGCACAGTGCTAGCAGAAGCCCAAGCAACAGTCCAATAAGGCGCAGTACTAGCAGAAGCCCAAGCAAGGTGTGATAATTGTTAATTCATGAAGTTGT GGATGATGGTGACCGGTGAGTGCTTGGAAGTTTGCCTAGAAAAATTTACTTTGGCAGAAAAAGACAACTATATTTTGATTGAAGAACATTTTGATTTTCT CCTTTGAATTGAACTTTTAGACTTGTACCTTTTATTCTGCGTTGTCTATATAGAATTTAATGGACTATGCTTTCTATAGTAGACGTTTGAGTATCAAATT TATGTATTCGGTTCCTCTCCTTGGTTTATGACTTGATATTTATTGATTACTGTCTACCACTCAAAA BLAST
Tissuepods
Gene nameLI_gene_145788; 
Additional informationdetails; 

Expression of Ll_transcript_522256

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_522256
BlastpSerine/arginine-rich-splicing factor SR34 from Arabidopsis with 75% of identity
BlastxSerine/arginine-rich-splicing factor SR34 from Arabidopsis with 73.85% of identity
EggnogRna-binding protein(COG0724)
KeggLink to kegg annotations (AT1G02840)
CantataDBLink to cantataDB annotations (CNT0000194)
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019453086.1)
PfamRNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF00076.21)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;