Ll_transcript_522234

• Id Trinity: TRINITY_DN46599_c0_g1_i2
• Name Transcript: Ll_transcript_522234
• Sequence: AAAATATCTGATAGATCTTATTCTTTCTCGACTCTGTCCCATAAAAGCTAAAACCCTAACATTTGAAGATCTCACCTCAACGCGAGGGAATCCCCGCCGA ATCAAAGTGAAAATGAGTAGACGTTCCAGCAGAACTATCTACGTTGGGAATCTACCCGGTGATATTCGTGAAAGAGAAGTCGAAGATCTGTTTATTAAGT ATGGACACATAGCTCACATTGACCTGAAGGTGCCACCAAGGCCCCCTGGTTACGCATTTGTGGAGTTTGAAGATTCTCAAGATGCTGAAGATGCAATTCG TGGGCGTGATGGCTATGATTTTGATGGGCACCGATTACGGGTGGAGCTTGCACATGGTGGGCGTGGTAATTCATCTTCAAGAGGAGACCGATATAATAGT CGCAGCAATGGACGAGGTGAAGGTGGACGTGGGGGTGGGATATCTAAGCGCTCTGATTACCGTGTTCTTGTCACAGGGTTGCCCTCTTCAGCTTCCTGGC AGGATCTTAAAGATCACATGCGAAAGGCAGGGGATGTTTGCTTCTCCCAAGTTTTTCGTGATGGAAGAGGTACAACTGGTATTGTGGACTACACCAACTA TGATGACATGAAATATGCTATCAAGAAGCTTGATGACTCTGAGTTTAAGAATGCCTTTTCCAGGGGTTATGTTCATGTGAGAGAATATGATTCAAGGAAG GACTCTAGAAGTCCTAGCCGTGATCGATCTCATTCCAGAGGAAGAAGCTATAGTCGCAGTCGTAGCCGTAGTTACAGTCCGGGTCACAACCGAAGTAAAT CTCCAAAGGGAAAATCTTCACGCAGTAAATCCCCAAAGGGAAAATCTTCACGCAGTAAATCCCCAAAGGGCAAATCTTCACGAAGTAAATCCCCAAAGGG AAAATCTTTGCGCCGTTCACCAGCTAAATCTCCTTCACGGTCTGCTTCTCGTTCTCGGTCAAGATCAAGGTCCCGCTCTTTATCAGGGTATATAATTTTC TGTTGAATGCATGCCATAATTTTGTCCATTATTATGTCTCTTATGTTTGCCTTTTCAGGCATTATTTTTGTGTTTGATTCTGTTATTTAGTATATGCTAA TGGATAGTGAACTATTTATCAATCTGGTTGAAGCTTCTTAGAAATGTGCATGGATCAATAAAGTTCACTCAGAAATGTCATATGGAATGAGGGAACATAG AGAACCATGGGTATCAATAATGAGCAGAATAAAAGTAATTGAGGTTTTAATTGACAGATCAATAATTCTTTTGTATCATGTCTAAGCAAACTTAATCTTA ACAACTCAATTTCACTTAAAACTACTAAGTCCTGTTAAAGTCAGTTATGCCTACCTTCTGTCGCTTGTTTGATAAGTATAAAGACTTACATTCGAAATCT TTCCTTAAGGTAAAAGAAAAGAAATTGGCATGTAAATACAGCATTGCTAGTCTGTTACTCGATGAATTTTTCTCCTGGTACCAACTGTTGCTCTCTTCCC TTTCCCTCTGTTGCTATTGTCTCCTTGATGCTTTGTTTGTGGATTCCTGCAAAACACGCCTCCTTGTCGTCATGTTCACTTTCAATCTCCTTTTAGTTTT TTATTTTAAATTCCTTTCTATGTGGTTTTTTTATCCTTAGAGATGGATACTTGAAGCAATCTGGGAATTGAAAATTAGGAACTTGGTGGGATTTGGTTCA GTTGCCTGCAACTCAATTTGTTGTAGACGTATGAGTGCTGGATTGGGAACAAAGGAGATCTCCAATTCCTATTTTAGAGCTGCACATGTTGTGTATAAAG ACAATTGTGATTTGAGAATTACCTCCAATGAGCAATAGAAACACTTTCTGTACATGTTGGCTTCAGGATTTGGCCATAGTGTGCAGTATCTGGATTCTCT GGATTTTGTGGTGCAATAGGGAAGATTTCTTGTATCTAGTTCTTTGGCTTAATATATTAGTTTGTAGTGCTCATTTTTCATCCATGGTTCATTATGCATA GAATGTCTACAAATTTCCCTTCTCTACCTTTTTAATGGCTATATACTTTACAATGTTTGTTTTACCTCTTGTGTTTGATATCTGTTGGGAGTGCAAGCAA GGCTGATGGATTCAATTTGATAAGGGAACTAGTGGATTTTAAAATTCTTTCTGTGGAACTTTTGCAGATCGCGATCAAGATCAAGGTCTCCTTTGCCATT GCGTAACAAGAGCCCAACAAGACGCAGTCCAAGCAGAAGCCCGAGTAAGAGTCCAAAAAGACACAGTGCTAGCAGAAGCCCAACTAAGAGCCCAAAAAGA CGCAGTGCTAGCAGAAGCCCAAGTGAGAGCCCAAAAAGGCGCAGTGCTAGCAGAAGCCCAAGTAGGGGTGAGGTCTGATTATTGTTAATTCATGAAGTTG TGGATGATGGTGACTTGTTGGTGCTTCAAAGTTTTCCAGAAAAAGGCTTATTTGGCTTGAAAAACTTGTTGATTATCTCCTTTGAATTGAACTTTTAAAC TTCTACCTTTTATTCTGCGTAGTCTATGAGAATTTAATGAACAACAGCTTTCTTTGATAAACTGTTGATATCAGATTTATCTGTCATTGGCCTGTATTAC TACAGTAGTTTTTCAACCTTATGGTTTATGTACCATCATTATTGCCGTTATGTGAACACCTTATTGTTCACTTGTATTGATATATCGGGTCTGATGGTGT CATCTTGCATGAAATTTGACAGCTAGGCGAGTTCTTATGGTTAAGTGTTCATGGTGATAGTGGTGTTCCCGGCTATGATGATGCCTAACTTGTCCTTCTA TATGTAGAATAAATGGGGGATGTGCACCCAAAACATTTGAATATGTCATAAGCATCAATAACAAATGGAAAAAAAGACTGTTTTTGG
• Tissue: pods
• Gene name: LI_gene_145788;
• Additional information: details;

Expression of Ll_transcript_522234

FPKM

• PAB: 5.9
• PNAB: 10.9
• PS1: 9
• PS2: 8.5
• PS3: 11.3
• PW1: 10
• PW2: 10.8
• PW3: 10.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_522234

• Blastp: Serine/arginine-rich-splicing factor SR34 from Arabidopsis with 74.51% of identity
• Blastx: Serine/arginine-rich-splicing factor SR34 from Arabidopsis with 71.94% of identity
• Eggnog: Rna-binding protein(COG0724)
• Kegg: Link to kegg annotations (AT1G02840)
• CantataDB: Link to cantataDB annotations (CNT0000194)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019428257.1)
• Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF00076.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;