Ll_transcript_522235

• Id Trinity: TRINITY_DN46599_c0_g1_i3
• Name Transcript: Ll_transcript_522235
• Sequence: CTTCGGTCTTTTTTAATTCCATTCCGTTCTTTCTCTCGACTCGTTCCTCTAAAACCCTAACATTCGAAGCTCTCATCTCAACGCGAACAATCTCCTAACC TAAGTGAAAATGAGTAGACATTCAAGCAGAACTATCTACGTTGGGAATCTACCAGGTGATATTCGTGAAAGAGAAGTTGAAGATTTGTTTTTTAAGTATG GACACATAGCTCACATTGACCTAAAGGTTCCACCAAGGCCCCCAGGTTATGCATTTGTGGAGTTTGAAGATCCTCAAGATGCTGAAGATGCTATTCGTGG GCGTGATGGCTATGATTTTGATGGGCACCGATTACGGGTTGAGCTTGCACATGGTGGGCGTGGTAATACATCTTCAAGAGACCGATATGATAGTCGCAGC AATGGACGGGGTGGAGGCGGACGTGGGGGCGGGATATCTAAGCGCTCTGATTATCGTGTTCTTGTCACGGGGTTGCCCTCTTCAGCTTCCTGGCAGGATC TTAAAGATCACATGCGAAAGGCAGGGGATGTTTGCTTCTCCCAAGTTTTTCGTGATGGAAGAGGTACAACTGGTATTGTTGATTACACAAACTATGATGA CATGAAATATGCTATCAAGAAGCTTGATGACTCTGAGTTTAAGAATGCCTTTTCCAGGGGTTATGTTCATGTGAGAGAATATGATTCAAGGAAGGACTCT AGAAGTCCTAGTCGTGATCGATCTTATTCCAGAGGAAGAAGCTATAGTCGCAGTCGTAGCCGTAGTTACAGTCCGGGCCACAGCCGAAGTAAATCTCCAA AGGGCAAATCTTCACGCAGTAAATCTCCAAAGGGCAAATCTTCACGCAGTAAATCTCCAAAGAGCAAACCTTCACGGCTTTCACCAGCTAAATCTCCTCC GCGGTCTGCTTCTCATTCTCGCTCAAGGTCAAGGTCCCGCTCTTTATCAAGGTACAAATTTTTATTTTGAATTTATGCCATATTTTTGTCCATTACTATC TCTCCTATGCTTTGCCTTTTCAGGTATTGTTTTTATGATTGATACTGTTATTTGGTATATCCTAATGGCTAGTGAACCATTTATCAATCTGTTTGGACCT TCTTAGGAATGTGCACTGTTCAATAGAGCTCACCCAGAAAAGGCATATGGAATGGGGGAACACAGGGTACCATGGATATCCATAATGAGCTGAATATAAG TAATTGGGGTTTTAATTGACGGACCAATTGAATTCTTTTGTGTCATGTCTTAGCAAACATAATTTTAACACCTCAATTTCACCAACTACCAAGTCCTGTT GAAGTCAGTTATGTTTACCTTATGTCGCTTGTTTGATAAGTATAAAGACTGTTACTTGTTACATTCAACACCTTCCCCCATCGACAATAAAAGAAAATGA GAATTTTGTATGTTAATACAACATTATTAATCTGTTATTCTCAATAAAAAAATCCTGACAAACTGTTGCTCTCTTCCCTTTCCCTCTGTCTGTTTTTCTT TCTTCCACACTTGGTTTGCGGGTTCCTGACAGAACATCCCTCCTAGCCATCGTGTTCACTTTCACTCTCGTTTTACTTTTATTTTTTAAGAATTCTTTTT TATTTTTGTGGTTTTTTATCCTTAGACATGGATACTTCAAGCAATCTGGGAATTGAAAATTAGAAACTTGATTGGATATGGTTCCAGTTGACTGCAACTC AATTTGTTGTGGAGGTATGATATTTTTTTAGATGGGGGCTTTGGATCCCTTCAAAGTACATCTGTTCTAATGCTTTTAGCTTGTAAATGACCCTGGGTGC TAGATTGGGAACAAAGGAGATCATCAATTGCTATTTTATAGCTGCATGTATTGTGTATAAAGACAACTGGGATTTGGGAATCACCACCAATGAGCAATAG AAACACTTTCCATATGATGTTGGCTTCAGGATTCGCCAAACCAATAGGGTGCAGTATCTGGATTCTCTGGATTTTGTGGTGCAATAGGGAAGATTTCTTG TATCCAGATCTCTGTTTTAATATGTTAGTTTGTGATGCTCATGCATAGGATGTCTACAAATTTCCCCTTTTTGCTTTCTCTACCTCCCAGGTTGCTATCT AATTTACAATGTTTGTTTTTACCTCTTCTGGGCATGATATGTGACTTGGGAGAGGAATCAAGGCTGTTGGATTCTATTTGATAAGGGAACTTGTGGATTT TTAAATTCTGTTTGTGGAACTTTTGCAGATCACTATCAAGATCAAGGTCTCCTTTGCCATTGGTGAGTGAATTCTTTATAACTAATTAAATGTTATTTTG CTGCATATATAGTCTCTTGGCTTGATTCAATCTTGTGATTTGCAACATAAAATGGGGAGCTTAGCCTCTTATAGTAGTCTAACCATAAGAAGAATCATTT GTCTTAGTGAGCAGTGACTGAGAACTCTTGATAAATTGTTTTTCCACTGAAGTGTGATAGAAAGCATATTTAAAAACTCCTCCCCAATTAATATATATTT TGTCAGCGTAATAAGAGCCCAAAAGGACGCAGTGCTAGCAGAAGCCCAAGAAAGAGTCCAAAAAGGTGCAGTGCTAGCAGAAGCCCAAGAAAAAGCCCAA TAAGGCACAGTGCTAGCAGAAGCCCAAGCAACAGTCCAATAAGGCGCAGTACTAGCAGAAGCCCAAGTAAGGGTTAGCCCATTCTTGTTTTTCTCTTGAT AATTTTGATATGCATTCCTTAATTTTCCCCATTCAAAAGTTGTCAGTGTTATAATCAAATCTGAGGTTTTTATTTTGGATCATGGTATGTCAGGCAAGGT GTGATAATTGTTAATTCATGAAGTTGTGGATGATGGTGACCGGTGAGTGCTTGGAAGTTTGCCTAGAAAAATTTACTTTGGCAGAAAAAGACAACTATAT TTTGATTGAAGAACATTTTGATTTTCTCCTTTGAATTGAACTTTTAGACTTGTACCTTTTATTCTGCGTTGTCTATATAGAATTTAATGGACTATGCTTT CTATAGTAGACGTTTGAGTATCAAATTTATGTATTCGGTTCCTCTCCTTGGTTTATGACTTGATATTTATTGATTACTGTCTACCACTCAAAA
• Tissue: pods
• Gene name: LI_gene_145788;
• Additional information: details;

Expression of Ll_transcript_522235

FPKM

• PAB: 0.2
• PNAB: 0.3
• PS1: 0.1
• PS2: 0.1
• PS3: 0.3
• PW1: 0.3
• PW2: 0.2
• PW3: 0.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_522235

• Blastp: Serine/arginine-rich-splicing factor SR34 from Arabidopsis with 75% of identity
• Blastx: Serine/arginine-rich-splicing factor SR34 from Arabidopsis with 73.85% of identity
• Eggnog: Rna-binding protein(COG0724)
• Kegg: Link to kegg annotations (AT1G02840)
• CantataDB: Link to cantataDB annotations (CNT0000194)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019453086.1)
• Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF00076.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;