| Id Trinity | TRINITY_DN46601_c0_g1_i12 |
|---|---|
| Name Transcript | Ll_transcript_433778 |
| Sequence | ATTGATCAAAATCATTTACTCATAATTCACATTGGTAATATTTCAAATTTAAGAAGAAGTAGAAGTACTTCATCACCTACCTAGAATTGAACGGAACCAC CACAAATCGCAACCCTTTGTTCCATTACAAAAATGTTGAAGCCATCATTTCATTATCTGAACTCGTTACCTTCTTCTCATTCCTCTACTTCTAATTTAAT CTCGATCAGGTTTCGTCGCACCGCCAAAATTTCAATGTCGATGTCAACGTCTCACGACACCGTTCCTCCTGAAAACCGCGTTGTTGTTGGATTTGGAATG ACGACGGTAGATTTCTTAGCTACCGTTGATGGATTTCCGAACCCGGACGACAAGGTCCGAACAACGTCGTTCAAGGTTCAAGGAGGTGGAAATGCCGGTA ATGCTATAACATGTGCTGCTCGGCTTGGCTTGAAACCCAAGCTCATCTCCAAGGTTGCAGATGATTCTCAAGGCACAGACATTTTGAACGAGCTGCAAGC TGATGGTGTTGATACTTCATTTATTGTGGTATCCAAGGGTGGTAGTTCAACATTTTCATATGTACTAATCGACAACCAAACGTAAGGCATTTACCATTAT GTTTTGACCATTATTTCCCACCCTGACAAATGAGTGCTTTTCTTTAACAACATGACTACTAATTCAAGGCTTAAAATAGCATGATCATATTAAGAAAAAC TTTACAGAACACAGTTTGATGATTGTATGCTTGAGCTCTAGGGTATTTCAGATTCATCAATGCCTCATATTTTTATTCGTTATATTCTAAATATGGAATT ATGCATAAAGGTGCATTGTTTTTTGTTACTTTTTTGAAATACTCATGCGAGTTCACTTTGAAAATTTTTCAACACCTTTCCATATATAATGTATTTCAAT TATTTAATCACATAACAACCTGGGATTATGTTTTATCGACAACACATCTGCATCAATACTTCCAGAAAAACTCGTACAAGTATTTACACCCCAGGAGAAC CTCCCATGGTGCCAGATGACTTGTCCCAGTCAACCTTATTATCTGCATTTGATGAAGCAAGATTAGTTTATTTTGATGGAATGTCTACTGAAACTGCTCT ATTTGTTGCACAGGAGGCAGCTCGCAACAATATTCCTATTTTAGTAGAGGCAGAATCACCAAGGGAAGGATTGGATGAACTCCTGAAGTTGGCTGATTAT GCTGTATGCTCTGCAAGGTTTCCACAGGTAGTATTCCTACTTTGTAACTCTTTCATCAGCTTATGTTTTAGCCTGCATGCATGCTGAATTTATTTGGACT ACATAAGTTTGGATTGTTTGTATGTTGAGAGTGGGGTATCTGTTCAAAGTCCAGTTTGAAAATACAGTTAGTATTGTTTTTGAAATTTCCTTCTTCTCAA CATACCAAATAAAAATGTTCCTTTTTTGTCATATTCACTGTACACTTACATTTTAACTTTGTTTTTTGTCATGCTCATGATGAATTTGAATTGCCGTGTT GTGCTCCTGTAGTTACATATATGGTGTTTCCATATGGTGCTGCTTATGTTTAAGTCATTTGTGGTGTAGTTATTTGGGATTTGAATGTGTATTTTAGGCT TGGACACAGGAACCATCTATTCCAAGTGCATTGGTTTCTATGCTTTTAAGATTGCCAAATATCAAATTTGTGATTGTGACTTTGGGTGAAGATGGATGTC TAATGTTGGAAAGAAGTGCAGACGAGGATGCTGACAGAGAAGAAAGGGATGCAGAGAGTTTTTTAGAATTCTTATATAAAGGAAAAGATGATAGCTTGAC CATCCCAACCTGCATATCATCAGTGGTGACAAAATTGAAAGGAAAGGGAATAGGGACACTGTGTGGGAGATTCTTTATTGGAACAGCAGAGAAAATACCT GATTCTGAACTAGTTGATACAACTGGTGCAGGGGATGCATTTATTGGAGCCATTATTTATGCTATCTGTGCAAACATGGCACCAGAGAAAATGTTACCAT TCGCTGCTCAAGTGGCAGCTGCCAAGTGTAGAGCTTTGGGAGCTCGAACTGGTCTTCCATATCATACAGATCCACGCTTGGCATCCTTTTTACACTAGAG GTAACTAATTGTATGCTGCATTCCGCAAGCATGGATCGCTCCAAAAATGAATCTTTTGATTCAGTATTCCCATCTAGCAAGCTTAACTCTCCTCCATCTC TGTTTACAGAGTGACTGTGCTTACTTTGTG BLAST |
| Tissue | pods |
| Gene name | LI_gene_145803; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_433778
| Blastp | Ribokinase from Mus with 36.14% of identity |
|---|---|
| Blastx | Ribokinase from Bacillus with 38.55% of identity |
| Eggnog | pfkb domain protein(COG0524) |
| Kegg | Link to kegg annotations (71336) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019444453.1) |
| Pfam | pfkB family carbohydrate kinase (PF00294.23) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |