Id Trinity | TRINITY_DN46601_c0_g1_i14 |
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Name Transcript | Ll_transcript_433780 |
Sequence | ATTGATCAAAATCATTTACTCATAATTCACATTGGTAATATTTCAAATTTAAGAAGAAGTAGAAGTACTTCATCACCTACCTAGAATTGAACGGAACCAC CACAAATCGCAACCCTTTGTTCCATTACAAAAATGTTGAAGCCATCATTTCATTATCTGAACTCGTTACCTTCTTCTCATTCCTCTACTTCTAATTTAAT CTCGATCAGGTTTCGTCGCACCGCCAAAATTTCAATGTCGATGTCAACGTCTCACGACACCGTTCCTCCTGAAAACCGCGTTGTTGTTGGATTTGGAATG ACGACGGTAGATTTCTTAGCTACCGTTGATGGATTTCCGAACCCGGACGACAAGGTCCGAACAACGTCGTTCAAGGTTCAAGGAGGTGGAAATGCCGGTA ATGCTATAACATGTGCTGCTCGGCTTGGCTTGAAACCCAAGCTCATCTCCAAGGTTGCAGATGATTCTCAAGGCACAGACATTTTGAACGAGCTGCAAGC TGATGGTGTTGATACTTCATTTATTGTGGTATCCAAGGGTGGTAGTTCAACATTTTCATATGTACTAATCGACAACCAAACAAAAACTCGTACAAGTATT TACACCCCAGGAGAACCTCCCATGGTGCCAGATGACTTGTCCCAGTCAACCTTATTATCTGCATTTGATGAAGCAAGATTAGTTTATTTTGATGGAATGT CTACTGAAACTGCTCTATTTGTTGCACAGGAGGCAGCTCGCAACAATATTCCTATTTTAGTAGAGGCAGAATCACCAAGGGAAGGATTGGATGAACTCCT GAAGTTGGCTGATTATGCTGTATGCTCTGCAAGGTTTCCACAGGTAGTATTCCTACTTTGTAACTCTTTCATCAGCTTATGTTTTAGCCTGCATGCATGC TGAATTTATTTGGACTACATAAGTTTGGATTGTTTGTATGTTGAGAGTGGGGTATCTGTTCAAAGTCCAGTTTGAAAATACAGTTAGTATTGTTTTTGAA ATTTCCTTCTTCTCAACATACCAAATAAAAATGTTCCTTTTTTGTCATATTCACTGTACACTTACATTTTAACTTTGTTTTTTGTCATGCTCATGATGAA TTTGAATTGCCGTGTTGTGCTCCTGTAGTTACATATATGGTGTTTCCATATGGTGCTGCTTATGTTTAAGTCATTTGTGGTGTAGTTATTTGGGATTTGA ATGTGTATTTTAGGCTTGGACACAGGAACCATCTATTCCAAGTGCATTGGTTTCTATGCTTTTAAGATTGCCAAATATCAAATTTGTGATTGTGACTTTG GGTGAAGATGGATGTCTAATGTTGGAAAGAAGTGCAGACGGTGAATACGCCACTGGCCTTTTCAATCTTACTTTATTTAGATTTCTTGAAGGGTAGCATA GTGCTGTATCATCATTGTTATGAGTTTCTTTTTTCTCCTTTTCAAGCAAGTATTTAGCTTAACATACAAGTTTAATGCTCTTTTTAGCAGAGGATGCTGA CAGAGAAGAAAGGGATGCAGAGAGTTTTTTAGAATTCTTATATAAAGGAAAAGATGATAGCTTGACCATCCCAACCTGCATATCATCAGTAAAATATTGT TGAACCTATAACTTCTTCAATTTATATTTTATTTTGACATATATTGTTGAAAGTAGAATGCCAGGACTGAATATAGAATCATACTTCTTTAGATCTTGGA GGGTCATAGTTGATATAAAAGAACCTTGTCCTAAAAGATACACGCAATGCAAAAACATGAATGCAAGAAAAACCATGTTCGGATATATGGATGGAATCGG AATATCGGATATATGGATCGACTCATTTTTTTGGAAGAAATCACTTCACTTTTTGCTTGAGATATGTTACAAATGCTTTATACAACAGCAATCACTTTTT ATCCCTTTGAATGGAATCGGAATATCGGATATATGGATCGACTAATTGGTGCCAAGAATTTTGTTAATAATATTAAACCAGGTAAAACACTTTTTCTCCT TTTATATTTGCTTAATGATTTTCACAGGTGGTGACAAAATTGAAAGGAAAGGGAATAGGGACACTGTGTGGGAGATTCTTTATTGGAACAGCAGAGAAAA TACCTGATTCTGAACTAGTTGATACAACTGGTGCAGGGGATGCATTTATTGGAGCCATTATTTATGGTAGGAGTATTACTGGCCTAGGCTGATTTTTTTA TCCTTTGTCTAAGCATCTTAATTGAGACATAAATCAGATTATTTGGGGTTTTTCATGGTTTGAAATTGATACTCTCCTAATAACTAATCAGTGTAAGCTC AGAGTACCAGGTGGACAGAAAAAAGAGCTCATATATGGTCCTCTGAGATTAAGATAGTAGTAAAGCTGCCAAGAGTGACACAACTTCCTCTTTGTGTTTA CATTAGTTAAAAGGTTCAGGATACTGAATTATGCTCTCTGACTTTTTTTGTAGCTATCTGTGCAAACATGGCACCAGAGAAAATGTTACCATTCGCTGCT CAAGTGGCAGCTGCCAAGTGTAGAGCTTTGGGAGCTCGAACTGGTCTTCCATATCATACAGATCCACGCTTGGCATCCTTTTTACACTAGAGAGTGACTG TGCTTACTTTGTGGTTACTTGTAGATGTTTTGTTGTAAGATGTATCCTATGGTTTGTAAAGAATCATGAGTTCAACAAGTATAGAGTTTCTTCGCTAACT ATGGCCTGGCCATCACCCTTTCCCTGACGTTGTCTTGATCATCCTCGGTAGGGTTGCGGGGTGCTGTTAAACCAGTGTGTTATTGGGGTGTCTTCCCCAT TTCTAATTGCTTGGTGTCAATATAATTTTACATTTCCGGACATCTCACTTGGGAATGTGGTTTACTATGTTTAGTAGAATGTTATAAAAATATTTACCCA GATAAATAGGAATGAATCATTTGCAATGGGTGTAGGAAATTTGAACTTTGACCTTTTAGATGGGAATATTTTTACACTCCAAGAACATGCTTTAAATCAT GTTGGATGCCAAAAGCTACCTTAGAGGGTCCTGTTTCTCAGTGTAGGAAATGCTTCCATTGTGTAAGTTGTGATTATTGGTTCAACTAAATTCAAAGGCC CTCAAGGGTACAATATTGGTAGCCGGATTTGAATGAAGTCCAAACTAAATTTAATAGTTTGGCTTAAAATTTGATGATTCTATTTTCCACTTGAGTGTCA TTCAAGTCATTCCAATAGAATATTGAGTTTCCTTCAGTATGAGGGAACCTTTTATGTAATTTAACTTACATAAAAGAGGTGTGAGTGCCTTGAAAGCAGA AATCATCAAATTTGATTAAATTCCATGGATACATAAATACCCAATGGAAGAAAGAGGTGACTCATTCTCGCACTCTTTTCTTTGGTGATGACTGTCTCAT GGACCCAAAAGCCAAGCATGGCTCGGTTGAATACATCAACTTGGATGGAAAGAATGTTGGTGCAACCATGC BLAST |
Tissue | pods |
Gene name | LI_gene_145803; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_433780
Blastp | Ketohexokinase from Homo with 24.34% of identity |
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Blastx | Ribokinase from Bacillus with 28.25% of identity |
Eggnog | Ketohexokinase(ENOG4111F4Q) |
Kegg | Link to kegg annotations (3795) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019444452.1) |
Pfam | pfkB family carbohydrate kinase (PF00294.23) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |